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  5. PSME_00039447-RA

PSME_00039447-RA


Description : (at2g28500 : 163.0) LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). & (reliability: 326.0) & (original description: no original description)


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039447-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_03191 No alias lob domain-containing protein 15 0.01 Orthogroups_2024-Update
A4A49_25203 No alias lob domain-containing protein 11 0.01 Orthogroups_2024-Update
At3g27650 No alias LOB domain-containing protein 25... 0.03 Orthogroups_2024-Update
At5g15060 No alias LOB domain-containing protein 34... 0.01 Orthogroups_2024-Update
Bradi1g65760 No alias LOB domain-containing protein 1 0.01 Orthogroups_2024-Update
Bradi2g53690 No alias LOB domain-containing protein 13 0.01 Orthogroups_2024-Update
Brara.C02407.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F03189.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G01214.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.01 Orthogroups_2024-Update
GRMZM2G092517 No alias LOB domain-containing protein 13 0.01 Orthogroups_2024-Update
GRMZM2G133806 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Orthogroups_2024-Update
GRMZM2G154320 No alias ASYMMETRIC LEAVES 2-like 1 0.01 Orthogroups_2024-Update
GRMZM2G447176 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Orthogroups_2024-Update
Glyma.04G106400 No alias ASYMMETRIC LEAVES 2-like 1 0.02 Orthogroups_2024-Update
Glyma.10G213500 No alias LOB domain-containing protein 1 0.03 Orthogroups_2024-Update
Glyma.13G349700 No alias LOB domain-containing protein 22 0.01 Orthogroups_2024-Update
Glyma.14G021100 No alias LOB domain-containing protein 24 0.01 Orthogroups_2024-Update
Glyma.14G056700 No alias LOB domain-containing protein 13 0.1 Orthogroups_2024-Update
Glyma.15G258100 No alias LOB domain-containing protein 4 0.02 Orthogroups_2024-Update
Glyma.17G086300 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Orthogroups_2024-Update
Glyma.20G023400 No alias LOB domain-containing protein 4 0.02 Orthogroups_2024-Update
HORVU3Hr1G016690.1 No alias AS2/LOB-type transcription factor 0.01 Orthogroups_2024-Update
LOC_Os01g39220 No alias DUF260 domain containing protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os01g60960 No alias DUF260 domain containing protein, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g03160 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g27980 No alias DUF260 domain containing protein, putative, expressed 0.01 Orthogroups_2024-Update
MA_10429262g0010 No alias (at5g63090 : 192.0) Involved in lateral organ... 0.01 Orthogroups_2024-Update
MA_170661g0010 No alias (at2g28500 : 149.0) LOB domain-containing protein 11... 0.06 Orthogroups_2024-Update
MA_19975g0010 No alias (at2g28500 : 96.3) LOB domain-containing protein 11... 0.03 Orthogroups_2024-Update
MA_451290g0010 No alias (at1g07900 : 140.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
MA_84752g0010 No alias (at2g40470 : 201.0) LOB domain-containing protein 15... 0.02 Orthogroups_2024-Update
MA_902082g0010 No alias (at1g07900 : 123.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
MA_9412105g0010 No alias (at2g40470 : 200.0) LOB domain-containing protein 15... 0.01 Orthogroups_2024-Update
MA_9839150g0010 No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
MA_9924708g0010 No alias (at1g31320 : 131.0) LOB domain-containing protein 4... 0.01 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
PSME_00022332-RA No alias (at2g40470 : 197.0) LOB domain-containing protein 15... 0.02 Orthogroups_2024-Update
PSME_00048626-RA No alias (at1g07900 : 148.0) LOB domain-containing protein 1... 0.01 Orthogroups_2024-Update
PSME_00056008-RA No alias (at2g30130 : 185.0) Overexpression/activation tagged... 0.02 Orthogroups_2024-Update
Potri.001G081400 No alias LOB domain-containing protein 4 0.01 Orthogroups_2024-Update
Potri.001G345700 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Orthogroups_2024-Update
Potri.010G177100 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Orthogroups_2024-Update
Potri.013G081200 No alias LOB domain-containing protein 15 0.02 Orthogroups_2024-Update
Potri.013G156200 No alias LOB domain-containing protein 15 0.02 Orthogroups_2024-Update
Potri.014G167100 No alias LOB domain-containing protein 11 0.02 Orthogroups_2024-Update
Pp1s69_130V6 No alias ramosa 2 0.01 Orthogroups_2024-Update
Pp1s9_303V6 No alias No description available 0.07 Orthogroups_2024-Update
Seita.3G240500.1 No alias AS2/LOB-type transcription factor 0.08 Orthogroups_2024-Update
Seita.9G168800.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G443300.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G409200.1 No alias AS2/LOB-type transcription factor 0.01 Orthogroups_2024-Update
Sobic.005G004700.1 No alias AS2/LOB-type transcription factor 0.01 Orthogroups_2024-Update
Solyc01g044520 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.01 Orthogroups_2024-Update
Solyc01g109240 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.01 Orthogroups_2024-Update
Solyc05g048740 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.01 Orthogroups_2024-Update
Solyc06g050430 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g050950 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.01 Orthogroups_2024-Update
Solyc06g062630 No alias LOB domain-containing protein, putative (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Solyc06g064540 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc06g071660 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.07 Orthogroups_2024-Update
Solyc06g075330 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc11g008830 No alias Asymmetric leaves 2 (AHRD V3.3 *** A7L4B2_CARPA) 0.02 Orthogroups_2024-Update
Sopen11g004610 No alias Protein of unknown function DUF260 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 7 104
No external refs found!