Description : (at5g05390 : 575.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q40588|aso_tobac : 145.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Nicotiana tabacum (Common tobacco) & (reliability: 1150.0) & (original description: no original description)
Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00039507-RA | |
Cluster | HCCA clusters: Cluster_83 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_20277 | No alias | laccase-11 | 0.03 | Orthogroups_2024-Update | |
At3g09220 | No alias | Laccase-7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR40] | 0.02 | Orthogroups_2024-Update | |
At5g01190 | No alias | Laccase-10 [Source:UniProtKB/Swiss-Prot;Acc:Q6ID18] | 0.03 | Orthogroups_2024-Update | |
At5g03260 | No alias | Laccase-11 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZA1] | 0.03 | Orthogroups_2024-Update | |
At5g48100 | No alias | Laccase-15 [Source:UniProtKB/Swiss-Prot;Acc:Q84J37] | 0.02 | Orthogroups_2024-Update | |
Cre08.g360550 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
Glyma.11G233400 | No alias | laccase 5 | 0.04 | Orthogroups_2024-Update | |
LOC_Os01g27700 | No alias | laccase precursor protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g62490 | No alias | laccase precursor protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
PSME_00010271-RA | No alias | (at5g05390 : 664.0) putative laccase, a member of... | 0.05 | Orthogroups_2024-Update | |
PSME_00018746-RA | No alias | (at5g05390 : 742.0) putative laccase, a member of... | 0.06 | Orthogroups_2024-Update | |
PSME_00028638-RA | No alias | (at5g05390 : 656.0) putative laccase, a member of... | 0.03 | Orthogroups_2024-Update | |
PSME_00042445-RA | No alias | (at5g03260 : 679.0) putative laccase, a member of... | 0.03 | Orthogroups_2024-Update | |
Potri.006G087100 | No alias | laccase 17 | 0.03 | Orthogroups_2024-Update | |
Potri.008G064000 | No alias | Laccase/Diphenol oxidase family protein | 0.03 | Orthogroups_2024-Update | |
Potri.010G193100 | No alias | Laccase/Diphenol oxidase family protein | 0.02 | Orthogroups_2024-Update | |
Potri.011G120300 | No alias | laccase 17 | 0.02 | Orthogroups_2024-Update | |
Potri.016G106000 | No alias | laccase 7 | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005507 | copper ion binding | IEA | InterProScan predictions |
BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
No external refs found! |