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- Pseudotsuga menziesii
- Sequence
- PSME_00039581-RA
PSME_00039581-RA
Description : (q9ssy6|etr1_cucsa : 507.0) Ethylene receptor (EC 2.7.13.3) (CS-ETR1) - Cucumis sativus (Cucumber) & (at3g04580 : 496.0) Ethylene receptor, subfamily 2. Has serine kinase activity.; ETHYLENE INSENSITIVE 4 (EIN4); FUNCTIONS IN: ethylene binding, protein histidine kinase activity, receptor activity, glycogen synthase kinase 3 activity; INVOLVED IN: negative regulation of ethylene mediated signaling pathway; LOCATED IN: endomembrane system, endoplasmic reticulum membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: Signal transduction histidine kinase, hybrid-type, ethylene sensor (TAIR:AT3G23150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 992.0) & (original description: no original description)
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Pseudotsuga release: PSME_00039581-RA | |
| Cluster | HCCA clusters: Cluster_55 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| 110685 | No alias | Signal transduction histidine kinase, hybrid-type,... | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G089010 | No alias | Signal transduction histidine kinase, hybrid-type,... | 0.02 | Orthogroups_2024-Update | |
| HORVU6Hr1G045040.2 | No alias | ethylene receptor protein *(ETR/ERS) & EC_2.7... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os04g08740 | No alias | ethylene receptor, putative, expressed | 0.01 | Orthogroups_2024-Update | |
| Potri.019G014300 | No alias | Signal transduction histidine kinase, hybrid-type,... | 0.01 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| BP | GO:0000160 | phosphorelay signal transduction system | IEA | InterProScan predictions |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| BP | GO:0007165 | signal transduction | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0009987 | cellular process | None | Extended |
| BP | GO:0035556 | intracellular signal transduction | None | Extended |
| BP | GO:0050789 | regulation of biological process | None | Extended |
| BP | GO:0050794 | regulation of cellular process | None | Extended |
| BP | GO:0065007 | biological regulation | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Predicted GO |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Predicted GO |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
| MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR003018 | GAF | 163 | 312 |
| IPR003594 | HATPase_C | 460 | 589 |
| IPR001789 | Sig_transdc_resp-reg_receiver | 618 | 698 |
