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  5. PSME_00039617-RA

PSME_00039617-RA


Description : (at4g17500 : 120.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (q40479|erf2_tobac : 114.0) Ethylene-responsive transcription factor 2 (Ethylene-responsive element-binding factor 2) (EREBP-2) (NtERF2) - Nicotiana tabacum (Common tobacco) & (reliability: 240.0) & (original description: no original description)


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039617-RA
Cluster HCCA clusters: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
A4A49_21042 No alias ethylene-responsive transcription factor 4 0.04 Orthogroups_2024-Update
At1g22985 No alias CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874] 0.03 Orthogroups_2024-Update
At1g36060 No alias Ethylene-responsive transcription factor ERF055... 0.03 Orthogroups_2024-Update
At1g68550 No alias Ethylene-responsive transcription factor ERF118... 0.03 Orthogroups_2024-Update
At5g61600 No alias Ethylene-responsive transcription factor ERF104... 0.04 Orthogroups_2024-Update
Bradi1g17961 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g41543 No alias Integrase-type DNA-binding superfamily protein 0.07 Orthogroups_2024-Update
Bradi4g41616 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.A02664.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.B00415.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.C00832.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.C01453.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.C01524.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.02 Orthogroups_2024-Update
Brara.D02449.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.G01933.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.05 Orthogroups_2024-Update
Brara.G02121.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.G03053.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.02 Orthogroups_2024-Update
Brara.G03123.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.H01496.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.I01789.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.I04175.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.I04678.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.I05419.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.I05614.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.J00058.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.K00718.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.04 Orthogroups_2024-Update
Brara.K01035.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G173771 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
GRMZM2G466044 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
GRMZM5G852704 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Glyma.01G147600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G201700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.04G217400 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G186700 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G111300 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G295300 No alias Integrase-type DNA-binding superfamily protein 0.07 Orthogroups_2024-Update
Glyma.08G320700 No alias ethylene responsive element binding factor 3 0.03 Orthogroups_2024-Update
Glyma.10G036600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G239400 No alias C-repeat-binding factor 4 0.02 Orthogroups_2024-Update
Glyma.13G304300 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.15G095600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G145300 No alias ethylene responsive element binding factor 5 0.05 Orthogroups_2024-Update
Glyma.18G252400 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.18G262800 No alias related to AP2 11 0.04 Orthogroups_2024-Update
Glyma.20G070100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G070410.3 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G037540.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.07 Orthogroups_2024-Update
HORVU4Hr1G015350.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G062430.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g21120 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g13710 No alias ethylene-responsive transcription factor TINY, putative,... 0.03 Orthogroups_2024-Update
LOC_Os04g52090 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g11860 No alias ethylene-responsive transcription factor, putative, expressed 0.08 Orthogroups_2024-Update
LOC_Os07g10410 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g11480 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10062104g0010 No alias (at1g74930 : 115.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_10343854g0010 No alias (at1g74930 : 110.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_1037g0020 No alias (at1g74930 : 134.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_10433094g0010 No alias (at1g74930 : 123.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_108992g0010 No alias (at1g74930 : 121.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_164803g0010 No alias (at5g11590 : 119.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_175747g0010 No alias (at1g74930 : 119.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_203191g0010 No alias (at1g28360 : 85.9) encodes a member of the ERF (ethylene... 0.04 Orthogroups_2024-Update
MA_33394g0020 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_4929994g0010 No alias (original description: no original description) 0.02 Orthogroups_2024-Update
MA_8574268g0010 No alias (at5g11590 : 123.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_88g0020 No alias (at1g74930 : 118.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_896002g0010 No alias (at5g11590 : 147.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_8984558g0010 No alias (at1g74930 : 107.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_922309g0010 No alias (at4g17500 : 92.0) Encodes a member of the ERF (ethylene... 0.04 Orthogroups_2024-Update
MA_924346g0010 No alias (at1g77200 : 104.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_98464g0010 No alias (at1g78080 : 107.0) Encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00004891-RA No alias (at1g74930 : 122.0) encodes a member of the DREB... 0.06 Orthogroups_2024-Update
PSME_00005183-RA No alias (at5g47220 : 92.8) Encodes a member of the ERF (ethylene... 0.05 Orthogroups_2024-Update
PSME_00037532-RA No alias (at5g61890 : 129.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00040934-RA No alias (at5g64750 : 100.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00046052-RA No alias (at1g19210 : 89.0) encodes a member of the DREB... 0.06 Orthogroups_2024-Update
PSME_00048384-RA No alias (at5g11190 : 113.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00054258-RA No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update
PSME_00054473-RA No alias (at5g64750 : 103.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00056166-RA No alias (at5g11590 : 103.0) encodes a member of the DREB... 0.05 Orthogroups_2024-Update
Potri.001G079800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G104200 No alias Integrase-type DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
Potri.006G138800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G091300 No alias related to AP2 11 0.05 Orthogroups_2024-Update
Potri.010G006800 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
Potri.019G131300 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Pp1s112_23V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s133_11V6 No alias c-repeat binding factor 4 0.06 Orthogroups_2024-Update
Pp1s221_67V6 No alias ap2 erebp transcription factor 0.03 Orthogroups_2024-Update
Pp1s25_13V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s30_284V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s340_16V6 No alias ethylene-responsive transcription 0.03 Orthogroups_2024-Update
Pp1s38_262V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.1G187800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G257300.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.2G156200.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.2G215500.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Seita.2G269600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G139200.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Seita.3G291500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G051200.1 No alias subgroup ERF-V transcription factor 0.02 Orthogroups_2024-Update
Seita.5G348000.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Seita.6G023800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G181700.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Seita.8G098100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G100500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G167900.1 No alias subgroup ERF-IX transcription factor 0.05 Orthogroups_2024-Update
Sobic.006G168000.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G170800.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G133566.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g007180 No alias No description available 0.03 Orthogroups_2024-Update
Solyc04g014530 No alias Ethylene Response Factor C.2 0.03 Orthogroups_2024-Update
Solyc06g035700 No alias Dehydration responsive element binding transcription... 0.03 Orthogroups_2024-Update
Sopen04g006170 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen06g018310 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen06g022520 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen12g022660 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 131 181
No external refs found!