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  5. PSME_00039699-RA

PSME_00039699-RA


Description : (at3g06920 : 91.7) Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: fruit; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: proton gradient regulation 3 (TAIR:AT4G31850.1); Has 81615 Blast hits to 15733 proteins in 342 species: Archae - 9; Bacteria - 150; Metazoa - 1130; Fungi - 1463; Plants - 75788; Viruses - 0; Other Eukaryotes - 3075 (source: NCBI BLink). & (reliability: 183.4) & (original description: no original description)


Gene families : OG_42_0002497 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002497_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039699-RA
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
PSME_00013689-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00037639-RA No alias (at2g40240 : 140.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 255 287
IPR002885 Pentatricopeptide_repeat 215 241
IPR002885 Pentatricopeptide_repeat 181 208
No external refs found!