PSME_00039728-RA

Description : (q39857|xth_soybn : 318.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (at5g13870 : 304.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 608.0) & (original description: no original description)

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00039728-RA
Cluster	HCCA clusters: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
413363	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.02	Orthogroups_2024-Update
98543	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.02	Orthogroups_2024-Update
A4A49_17794	No alias	putative xyloglucan endotransglucosylasehydrolase protein 26	0.03	Orthogroups_2024-Update
A4A49_30032	No alias	putative xyloglucan endotransglucosylasehydrolase protein 16	0.02	Orthogroups_2024-Update
At5g13870	No alias	Xyloglucan endotransglucosylase/hydrolase...	0.04	Orthogroups_2024-Update
GRMZM2G004699	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.02	Orthogroups_2024-Update
GRMZM2G112619	No alias	xyloglucan endotransglucosylase/hydrolase 26	0.02	Orthogroups_2024-Update
Glyma.17G065000	No alias	xyloglucan endotransglycosylase 6	0.02	Orthogroups_2024-Update
Glyma.17G065200	No alias	xyloglucan endotransglycosylase 6	0.02	Orthogroups_2024-Update
MA_15222g0020	No alias	(at3g44990 : 243.0) xyloglucan endo-transglycosylase;...	0.04	Orthogroups_2024-Update
MA_75919g0010	No alias	(at2g36870 : 300.0) xyloglucan...	0.03	Orthogroups_2024-Update
Mp8g18980.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Orthogroups_2024-Update
PSME_00001200-RA	No alias	(at4g03210 : 352.0) encodes a member of xyloglucan...	0.05	Orthogroups_2024-Update
PSME_00001209-RA	No alias	(at4g03210 : 309.0) encodes a member of xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00011921-RA	No alias	(at4g03210 : 296.0) encodes a member of xyloglucan...	0.02	Orthogroups_2024-Update
PSME_00016554-RA	No alias	(at2g36870 : 288.0) xyloglucan...	0.05	Orthogroups_2024-Update
PSME_00017708-RA	No alias	(at4g03210 : 291.0) encodes a member of xyloglucan...	0.05	Orthogroups_2024-Update
PSME_00022622-RA	No alias	(q41638\|xtha_phaan : 479.0) Xyloglucan...	0.05	Orthogroups_2024-Update
PSME_00022999-RA	No alias	(at5g57530 : 289.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00023360-RA	No alias	(p35694\|bru1_soybn : 312.0) Brassinosteroid-regulated...	0.03	Orthogroups_2024-Update
PSME_00030735-RA	No alias	(at4g37800 : 286.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00030736-RA	No alias	(at4g37800 : 278.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00035710-RA	No alias	(at2g36870 : 291.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00045889-RA	No alias	(p35694\|bru1_soybn : 350.0) Brassinosteroid-regulated...	0.04	Orthogroups_2024-Update
Potri.018G094800	No alias	Xyloglucan endotransglucosylase/hydrolase family protein	0.03	Orthogroups_2024-Update
Pp1s11_339V6	No alias	xyloglucan endotransglucosylase hydrolase protein a	0.02	Orthogroups_2024-Update
Solyc03g093130	No alias	xyloglucan endotransglucosylase-hydrolase 3	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	InterProScan predictions
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004527	exonuclease activity	IEP	Predicted GO
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010713	XET_C	194	240
IPR000757	GH16	33	114

External Links

No external refs found!

PSME_00039728-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation