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  5. PSME_00039733-RA

PSME_00039733-RA


Description : (at5g46330 : 311.0) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.; FLAGELLIN-SENSITIVE 2 (FLS2); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT4G20140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93194|rpk1_iponi : 269.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 600.0) & (original description: no original description)


Gene families : OG_42_0002753 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002753_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039733-RA
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
MA_10432854g0010 No alias (at2g34930 : 178.0) disease resistance family protein /... 0.03 Orthogroups_2024-Update
MA_82361g0020 No alias (at3g05660 : 111.0) receptor like protein 33 (RLP33);... 0.03 Orthogroups_2024-Update
MA_827806g0010 No alias (at3g05660 : 132.0) receptor like protein 33 (RLP33);... 0.03 Orthogroups_2024-Update
PSME_00003042-RA No alias (at4g20140 : 307.0) Encodes GASSHO1 (GSO1), a putative... 0.07 Orthogroups_2024-Update
PSME_00015116-RA No alias (at1g35710 : 314.0) Protein kinase family protein with... 0.05 Orthogroups_2024-Update
PSME_00019487-RA No alias (at5g46330 : 298.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00029120-RA No alias (at5g46330 : 346.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00042435-RA No alias (at5g46330 : 350.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00049138-RA No alias (at4g20140 : 429.0) Encodes GASSHO1 (GSO1), a putative... 0.05 Orthogroups_2024-Update
PSME_00052365-RA No alias (at3g24240 : 207.0) Leucine-rich repeat receptor-like... 0.07 Orthogroups_2024-Update
PSME_00053048-RA No alias (at5g25910 : 241.0) putative disease resistance protein... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 95 134
IPR001611 Leu-rich_rpt 449 488
IPR001611 Leu-rich_rpt 40 86
IPR001611 Leu-rich_rpt 333 355
IPR001611 Leu-rich_rpt 573 595
IPR001611 Leu-rich_rpt 161 183
IPR001611 Leu-rich_rpt 652 672
IPR001611 Leu-rich_rpt 381 399
No external refs found!