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PSME_00039762-RA


Description : (at1g54380 : 86.7) spliceosome protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: spliceosome assembly, nuclear mRNA splicing, via spliceosome; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Survival motor neuron interacting protein 1 (InterPro:IPR007022); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42510.2); Has 222 Blast hits to 205 proteins in 80 species: Archae - 0; Bacteria - 6; Metazoa - 98; Fungi - 6; Plants - 54; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). & (reliability: 173.4) & (original description: no original description)


Gene families : OG_42_0005813 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005813_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039762-RA
Cluster HCCA clusters: Cluster_183


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR035426 Gemin2/Brr1 31 216
No external refs found!