1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00039938-RA

PSME_00039938-RA


Description : (at5g15720 : 152.0) Contains lipase signature motif and GDSL domain.; GDSL-motif lipase 7 (GLIP7); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G29670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p40603|apg_brana : 91.3) Anter-specific proline-rich protein APG (Protein CEX) (Fragment) - Brassica napus (Rape) & (reliability: 304.0) & (original description: no original description)


Gene families : OG_42_0000097 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000097_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039938-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_04222 No alias gdsl esteraselipase 0.04 Orthogroups_2024-Update
At3g50400 No alias GDSL esterase/lipase At3g50400... 0.03 Orthogroups_2024-Update
At4g18970 No alias GDSL-like Lipase/Acylhydrolase superfamily protein... 0.02 Orthogroups_2024-Update
At5g15720 No alias GDSL esterase/lipase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFJ9] 0.02 Orthogroups_2024-Update
Bradi1g30034 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g48760 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g39622 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Brara.C00690.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D01402.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K01744.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G045215 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G101117 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G132331 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G223000 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G223100 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G089300 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G144900 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G020430.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G083820.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g44860 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g50690 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g17570 No alias GDSL-like lipase/acylhydrolase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434622g0020 No alias (at2g23540 : 402.0) GDSL-like Lipase/Acylhydrolase... 0.03 Orthogroups_2024-Update
PSME_00033443-RA No alias (at2g23540 : 394.0) GDSL-like Lipase/Acylhydrolase... 0.05 Orthogroups_2024-Update
PSME_00035423-RA No alias (at2g23540 : 420.0) GDSL-like Lipase/Acylhydrolase... 0.05 Orthogroups_2024-Update
PSME_00037279-RA No alias (at5g15720 : 226.0) Contains lipase signature motif and... 0.05 Orthogroups_2024-Update
Potri.004G064500 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Orthogroups_2024-Update
Potri.008G216400 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Potri.011G076500 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G008100 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G267100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G165400.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.4G166400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G166500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G177600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G156700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G077800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G141300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G270500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g071620 No alias GDSL-motif lipase/hydrolase family protein 1 0.03 Orthogroups_2024-Update
Solyc02g071720 No alias Lipase, GDSL (AHRD V3.3 *** A0A103XTV4_CYNCS) 0.02 Orthogroups_2024-Update
Sopen02g020710 No alias GDSL-like Lipase/Acylhydrolase 0.02 Orthogroups_2024-Update
Sopen03g001910 No alias GDSL-like Lipase/Acylhydrolase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!