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  5. PSME_00040002-RA

PSME_00040002-RA


Description : (at1g05260 : 264.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (p22196|per2_arahy : 237.0) Cationic peroxidase 2 precursor (EC 1.11.1.7) (PNPC2) - Arachis hypogaea (Peanut) & (reliability: 528.0) & (original description: no original description)


Gene families : OG_42_0011262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011262_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040002-RA
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Mp5g10740.1 No alias Peroxidase 56 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA InterProScan predictions
BP GO:0006979 response to oxidative stress IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase_pln/fun/bac 85 331
No external refs found!