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  5. PSME_00040054-RA

PSME_00040054-RA


Description : (at3g13890 : 229.0) Encodes a putative transcription factor (MYB26).; myb domain protein 26 (MYB26); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 103 (TAIR:AT1G63910.1); Has 8800 Blast hits to 8217 proteins in 478 species: Archae - 0; Bacteria - 0; Metazoa - 734; Fungi - 453; Plants - 5838; Viruses - 3; Other Eukaryotes - 1772 (source: NCBI BLink). & (p20027|myb3_horvu : 194.0) Myb-related protein Hv33 - Hordeum vulgare (Barley) & (reliability: 458.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040054-RA
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
437219 No alias myb domain protein 86 0.02 Orthogroups_2024-Update
A4A49_01152 No alias transcription factor myb36 0.02 Orthogroups_2024-Update
A4A49_08988 No alias transcription factor myb21 0.02 Orthogroups_2024-Update
A4A49_19591 No alias myb-related protein myb4 0.06 Orthogroups_2024-Update
A4A49_26801 No alias transcription factor myb3 0.05 Orthogroups_2024-Update
A4A49_28985 No alias transcription repressor myb4 0.04 Orthogroups_2024-Update
At1g08810 No alias MYB60 [Source:UniProtKB/TrEMBL;Acc:A0A178WD25] 0.04 Orthogroups_2024-Update
At3g13540 No alias MYB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAR4] 0.03 Orthogroups_2024-Update
At3g30210 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LRU5] 0.02 Orthogroups_2024-Update
At3g48920 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SMT1] 0.02 Orthogroups_2024-Update
At4g28110 No alias MYB41 [Source:UniProtKB/TrEMBL;Acc:A0A178V452] 0.02 Orthogroups_2024-Update
At5g10280 No alias Transcription factor MYB92... 0.02 Orthogroups_2024-Update
At5g16600 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9SPG7] 0.02 Orthogroups_2024-Update
At5g52260 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5] 0.03 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.04 Orthogroups_2024-Update
Bradi2g17280 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Bradi2g36730 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
Bradi2g40620 No alias myb domain protein 86 0.04 Orthogroups_2024-Update
Bradi3g17165 No alias myb domain protein 103 0.06 Orthogroups_2024-Update
Bradi3g36370 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
Bradi3g37047 No alias myb domain protein 30 0.01 Orthogroups_2024-Update
Bradi3g49190 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Bradi3g52260 No alias myb domain protein 58 0.04 Orthogroups_2024-Update
Bradi4g22637 No alias myb domain protein 94 0.05 Orthogroups_2024-Update
Bradi4g23967 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Bradi4g29796 No alias myb domain protein 20 0.04 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Brara.A01549.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.B01349.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03345.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03395.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.C01184.1 No alias MYB class-R2R3 subgroup-14 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
Brara.F01643.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.02 Orthogroups_2024-Update
Brara.F03146.1 No alias transcriptional regulator *(TDF1) 0.02 Orthogroups_2024-Update
Brara.G03210.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I00351.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G011422 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
GRMZM2G013581 No alias myb domain protein 48 0.02 Orthogroups_2024-Update
GRMZM2G167829 No alias myb domain protein 87 0.02 Orthogroups_2024-Update
Glyma.04G170100 No alias myb domain protein 94 0.04 Orthogroups_2024-Update
Glyma.05G027000 No alias myb domain protein 94 0.04 Orthogroups_2024-Update
Glyma.06G003800 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Glyma.06G193600 No alias myb domain protein 94 0.05 Orthogroups_2024-Update
Glyma.08G031300 No alias myb domain protein 68 0.03 Orthogroups_2024-Update
Glyma.09G238800 No alias myb domain protein 30 0.03 Orthogroups_2024-Update
Glyma.11G194100 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
Glyma.12G177700 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
Glyma.15G066800 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.16G189400 No alias myb domain protein 18 0.03 Orthogroups_2024-Update
Glyma.17G099800 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Glyma.17G158000 No alias myb domain protein 84 0.04 Orthogroups_2024-Update
Glyma.17G232220 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.18G259100 No alias myb domain protein 30 0.02 Orthogroups_2024-Update
Glyma.19G184500 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
HORVU3Hr1G065880.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G072450.2 No alias MYB class-R2R3 transcription factor & MYB class-R2R3... 0.03 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os03g25550 No alias myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os05g46610 No alias myb-like DNA-binding domain containing protein,... 0.04 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g07640 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10048467g0010 No alias (at5g35550 : 171.0) TT2 encodes a R2R3 MYB domain... 0.03 Orthogroups_2024-Update
MA_14061g0010 No alias (at5g57620 : 229.0) Encodes a putative transcription... 0.06 Orthogroups_2024-Update
MA_175772g0010 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
MA_24271g0020 No alias (at1g34670 : 257.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
MA_6393g0010 No alias (at5g57620 : 235.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_96853g0010 No alias (p93417|gam1_orysa : 259.0) Transcription factor GAMYB... 0.03 Orthogroups_2024-Update
Mp3g07510.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.06 Orthogroups_2024-Update
PSME_00014669-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.06 Orthogroups_2024-Update
PSME_00019912-RA No alias (at5g49620 : 209.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00026452-RA No alias (at3g61250 : 251.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00028766-RA No alias (at3g01140 : 277.0) Encodes a MIXTA-like MYB gene NOECK... 0.04 Orthogroups_2024-Update
PSME_00035305-RA No alias (at5g57620 : 219.0) Encodes a putative transcription... 0.01 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.05 Orthogroups_2024-Update
PSME_00041772-RA No alias (at5g15310 : 261.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00043973-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00045716-RA No alias (at5g15310 : 288.0) Member of the R2R3 factor gene... 0.06 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.01 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.07 Orthogroups_2024-Update
PSME_00051633-RA No alias (at3g61250 : 281.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.06 Orthogroups_2024-Update
PSME_00052005-RA No alias (at3g02940 : 213.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
Potri.001G005100 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.001G258700 No alias myb domain protein 46 0.04 Orthogroups_2024-Update
Potri.003G114100 No alias myb domain protein 42 0.03 Orthogroups_2024-Update
Potri.006G275900 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.008G128500 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Potri.014G081200 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.04 Orthogroups_2024-Update
Potri.018G127700 No alias myb domain protein 82 0.03 Orthogroups_2024-Update
Potri.019G036400 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Pp1s106_216V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.01 Orthogroups_2024-Update
Pp1s2_55V6 No alias myb transcription factor 0.05 Orthogroups_2024-Update
Seita.1G250900.1 No alias accessory protein (LMI2) of floral meristem identity control 0.02 Orthogroups_2024-Update
Seita.3G142100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G333800.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Seita.6G154200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.8G006900.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Seita.8G237700.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G390800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G340900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G196000.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc01g087130 No alias R2R3MYB transcription factor 47 0.03 Orthogroups_2024-Update
Solyc02g067340 No alias R2R3MYB transcription factor 96 0.03 Orthogroups_2024-Update
Solyc05g053330 No alias MYB transcription factor (AHRD V3.3 *** Q39550_CRAPL) 0.03 Orthogroups_2024-Update
Solyc07g052300 No alias R2R3MYB transcription factor 101 0.02 Orthogroups_2024-Update
Sopen05g031840 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen07g003890 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 110
IPR001005 SANT/Myb 14 61
No external refs found!