1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00040215-RA

PSME_00040215-RA


Description : (at1g44800 : 280.0) nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G08300.1); Has 4156 Blast hits to 4146 proteins in 764 species: Archae - 34; Bacteria - 2214; Metazoa - 4; Fungi - 0; Plants - 1218; Viruses - 0; Other Eukaryotes - 686 (source: NCBI BLink). & (reliability: 560.0) & (original description: no original description)


Gene families : OG_42_0000223 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000223_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040215-RA
Cluster HCCA clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G076800 No alias nodulin MtN21 /EamA-like transporter family protein 0.03 Orthogroups_2024-Update
PSME_00002154-RA No alias (at3g18200 : 265.0) nodulin MtN21 /EamA-like transporter... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000620 EamA_dom 166 304
IPR000620 EamA_dom 14 148
No external refs found!