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  5. PSME_00040332-RA

PSME_00040332-RA


Description : (at5g59720 : 219.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p27396|hsp11_dauca : 216.0) 17.8 kDa class I heat shock protein (Clone DCHSP17.7) - Daucus carota (Carrot) & (reliability: 438.0) & (original description: no original description)


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040332-RA
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
A4A49_36429 No alias 17.3 kda class ii heat shock protein 0.03 Orthogroups_2024-Update
Brara.A01210.1 No alias class-C-V small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Brara.D00767.1 No alias class-PX small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Brara.E01350.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Brara.H00106.1 No alias class-C-III small heat-shock-responsive protein 0.06 Orthogroups_2024-Update
Cre14.g617400 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G046382 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G083810 No alias 17.6 kDa class II heat shock protein 0.07 Orthogroups_2024-Update
GRMZM2G098167 No alias HSP20-like chaperones superfamily protein 0.07 Orthogroups_2024-Update
Glyma.01G106800 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G054400 No alias 17.6 kDa class II heat shock protein 0.09 Orthogroups_2024-Update
Glyma.06G054700 No alias 17.6 kDa class II heat shock protein 0.1 Orthogroups_2024-Update
Glyma.07G200200 No alias HSP20-like chaperones superfamily protein 0.08 Orthogroups_2024-Update
Glyma.08G068700 No alias HSP20-like chaperones superfamily protein 0.06 Orthogroups_2024-Update
Glyma.08G068800 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
Glyma.10G176400 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G175700 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G176200 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G176300 No alias HSP20-like chaperones superfamily protein 0.11 Orthogroups_2024-Update
Glyma.13G176500 No alias HSP20-like chaperones superfamily protein 0.1 Orthogroups_2024-Update
Glyma.14G099900 No alias 17.6 kDa class II heat shock protein 0.06 Orthogroups_2024-Update
Glyma.17G224900 No alias 17.6 kDa class II heat shock protein 0.07 Orthogroups_2024-Update
Glyma.19G011400 No alias HSP20-like chaperones superfamily protein 0.08 Orthogroups_2024-Update
Glyma.20G015900 No alias 17.6 kDa class II heat shock protein 0.08 Orthogroups_2024-Update
Glyma.20G078400 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
HORVU0Hr1G020420.1 No alias class-PX small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G007500.4 No alias class-C-I small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G020390.1 No alias class-C-II small heat-shock-responsive protein 0.05 Orthogroups_2024-Update
HORVU3Hr1G020520.6 No alias class-C-II small heat-shock-responsive protein 0.06 Orthogroups_2024-Update
Kfl00173_0020 kfl00173_0020_v1.1 (p12810|hsp11_wheat : 107.0) 16.9 kDa class I heat shock... 0.02 Orthogroups_2024-Update
Kfl00404_0080 kfl00404_0080_v1.1 (at1g53540 : 122.0) HSP20-like chaperones superfamily... 0.01 Orthogroups_2024-Update
LOC_Os06g14240 No alias hsp20/alpha crystallin family protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_24774g0010 No alias (at5g59720 : 211.0) encodes a low molecular weight heat... 0.05 Orthogroups_2024-Update
Mp7g16750.1 No alias 18.5 kDa class I heat shock protein OS=Glycine max... 0.02 Orthogroups_2024-Update
PSME_00026311-RA No alias (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.009G039200 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
Potri.009G049800 No alias HSP20-like chaperones superfamily protein 0.05 Orthogroups_2024-Update
Potri.009G147900 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Potri.011G001600 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G081200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Pp1s350_28V6 No alias contains EST AU093701(C63333) [Oryza sativa (japonica... 0.03 Orthogroups_2024-Update
Pp1s85_11V6 No alias 18.5 kDa class I heat shock protein (HSP 18.5) [Glycine max] 0.02 Orthogroups_2024-Update
Seita.9G458200.1 No alias class-C-I small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Sobic.001G426000.1 No alias class-C-I small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Sobic.003G081900.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.010G104300.1 No alias class-PX small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Solyc08g062450 No alias Heat-shock protein, putative (AHRD V3.3 *** B9RQT7_RICCO) 0.04 Orthogroups_2024-Update
Solyc09g015020 No alias Heat-shock protein, putative (AHRD V3.3 *** B9S3B2_RICCO) 0.02 Orthogroups_2024-Update
Sopen01g045370 No alias Hsp20/alpha crystallin family 0.03 Orthogroups_2024-Update
Sopen06g032930 No alias Hsp20/alpha crystallin family 0.02 Orthogroups_2024-Update
Sopen09g007990 No alias Hsp20/alpha crystallin family 0.02 Orthogroups_2024-Update
evm.model.contig_678.5 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 252 355
IPR002068 A-crystallin/Hsp20_dom 439 542
IPR002068 A-crystallin/Hsp20_dom 85 188
No external refs found!