Description : (at5g65700 : 1284.0) Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.; BARELY ANY MERISTEM 1 (BAM1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT3G49670.1). & (p93194|rpk1_iponi : 519.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 2568.0) & (original description: no original description)
Gene families : OG_42_0000799 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000799_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00040379-RA | |
Cluster | HCCA clusters: Cluster_203 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_05729 | No alias | leucine-rich repeat receptor-like... | 0.02 | Orthogroups_2024-Update | |
A4A49_07312 | No alias | leucine-rich repeat receptor-like... | 0.03 | Orthogroups_2024-Update | |
At4g20270 | No alias | Leucine-rich repeat receptor-like... | 0.02 | Orthogroups_2024-Update | |
At5g65700 | No alias | Leucine-rich repeat receptor-like... | 0.03 | Orthogroups_2024-Update | |
Bradi1g30160 | No alias | Leucine-rich receptor-like protein kinase family protein | 0.03 | Orthogroups_2024-Update | |
Bradi1g57900 | No alias | Leucine-rich receptor-like protein kinase family protein | 0.02 | Orthogroups_2024-Update | |
Brara.A01103.1 | No alias | LRR-XI protein kinase & EC_2.7 transferase transferring... | 0.04 | Orthogroups_2024-Update | |
Brara.F02442.1 | No alias | LRR-XI protein kinase & EC_2.7 transferase transferring... | 0.02 | Orthogroups_2024-Update | |
Glyma.02G281100 | No alias | Leucine-rich receptor-like protein kinase family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.08G302900 | No alias | Leucine-rich receptor-like protein kinase family protein | 0.03 | Orthogroups_2024-Update | |
MA_52165g0010 | No alias | (at5g65700 : 1071.0) Encodes a CLAVATA1-related receptor... | 0.03 | Orthogroups_2024-Update | |
Mp1g27720.1 | No alias | protein kinase (LRR-XI) | 0.04 | Orthogroups_2024-Update | |
PSME_00056044-RA | No alias | (at5g65700 : 783.0) Encodes a CLAVATA1-related receptor... | 0.05 | Orthogroups_2024-Update | |
Pp1s5_68V6 | No alias | receptor protein kinase clavata1 | 0.02 | Orthogroups_2024-Update | |
Sobic.010G267700.1 | No alias | LRR-XI protein kinase & EC_2.7 transferase transferring... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004672 | protein kinase activity | IEA | InterProScan predictions |
MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
BP | GO:0006468 | protein phosphorylation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003883 | CTP synthase activity | IEP | Predicted GO |
MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004180 | carboxypeptidase activity | IEP | Predicted GO |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Predicted GO |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | IEP | Predicted GO |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Predicted GO |
MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Predicted GO |
MF | GO:0005216 | ion channel activity | IEP | Predicted GO |
MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Predicted GO |
BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | Predicted GO |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
BP | GO:0006644 | phospholipid metabolic process | IEP | Predicted GO |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Predicted GO |
BP | GO:0006820 | anion transport | IEP | Predicted GO |
MF | GO:0008066 | glutamate receptor activity | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
BP | GO:0008272 | sulfate transport | IEP | Predicted GO |
MF | GO:0008509 | anion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015116 | sulfate transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015698 | inorganic anion transport | IEP | Predicted GO |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
BP | GO:0019637 | organophosphate metabolic process | IEP | Predicted GO |
MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Predicted GO |
MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
MF | GO:0022835 | transmitter-gated channel activity | IEP | Predicted GO |
MF | GO:0022836 | gated channel activity | IEP | Predicted GO |
MF | GO:0022838 | substrate-specific channel activity | IEP | Predicted GO |
MF | GO:0022839 | ion gated channel activity | IEP | Predicted GO |
MF | GO:0030594 | neurotransmitter receptor activity | IEP | Predicted GO |
MF | GO:0038023 | signaling receptor activity | IEP | Predicted GO |
BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | Predicted GO |
BP | GO:0046486 | glycerolipid metabolic process | IEP | Predicted GO |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Predicted GO |
MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | Predicted GO |
BP | GO:0052646 | alditol phosphate metabolic process | IEP | Predicted GO |
MF | GO:0060089 | molecular transducer activity | IEP | Predicted GO |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
BP | GO:0072348 | sulfur compound transport | IEP | Predicted GO |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | Predicted GO |
No external refs found! |