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  5. PSME_00040423-RA

PSME_00040423-RA


Description : (at3g21360 : 246.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Taurine catabolism dioxygenase TauD/TfdA (InterPro:IPR003819); Has 1029 Blast hits to 1021 proteins in 229 species: Archae - 0; Bacteria - 729; Metazoa - 46; Fungi - 17; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 492.0) & (original description: no original description)


Gene families : OG_42_0001175 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001175_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040423-RA
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
425605 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
439273 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
Brara.E02070.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00540_0060 kfl00540_0060_v1.1 (at3g21360 : 337.0) 2-oxoglutarate (2OG) and... 0.02 Orthogroups_2024-Update
MA_10427711g0010 No alias (at3g21360 : 233.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
MA_867753g0010 No alias (at3g21360 : 122.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
Mp4g14250.1 No alias Clavaminate synthase-like protein At3g21360... 0.02 Orthogroups_2024-Update
PSME_00006834-RA No alias (at3g21360 : 254.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00039920-RA No alias (at3g21360 : 263.0) 2-oxoglutarate (2OG) and... 0.05 Orthogroups_2024-Update
PSME_00044667-RA No alias (at3g21360 : 243.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00050620-RA No alias (at3g21360 : 240.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00050979-RA No alias (at3g21360 : 253.0) 2-oxoglutarate (2OG) and... 0.07 Orthogroups_2024-Update
PSME_00054983-RA No alias (at3g21360 : 156.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
Sobic.007G040301.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003756 protein disulfide isomerase activity IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 38 325
No external refs found!