1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00040493-RA

PSME_00040493-RA


Description : (at5g32470 : 528.0) Haem oxygenase-like, multi-helical; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C (InterPro:IPR004305); Has 1988 Blast hits to 1985 proteins in 797 species: Archae - 79; Bacteria - 1526; Metazoa - 2; Fungi - 151; Plants - 51; Viruses - 0; Other Eukaryotes - 179 (source: NCBI BLink). & (reliability: 1056.0) & (original description: no original description)


Gene families : OG_42_0003214 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040493-RA
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
442018 No alias Haem oxygenase-like, multi-helical 0.02 Orthogroups_2024-Update
LOC_Os08g45160 No alias TENA/THI-4 family protein, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004305 Thiaminase-2/PQQC 191 277
IPR004305 Thiaminase-2/PQQC 53 167
No external refs found!