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  5. PSME_00040685-RA

PSME_00040685-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000662 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040685-RA
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
PSME_00008027-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00009430-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00014951-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00017898-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00018776-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00021943-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00024980-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00025464-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00029767-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00036430-RA No alias no hits & (original description: no original description) 0.08 Orthogroups_2024-Update
PSME_00039009-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!