1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00040741-RA

PSME_00040741-RA


Description : (at5g09220 : 598.0) member of AAAP family; amino acid permease 2 (AAP2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 4 (TAIR:AT5G63850.1); Has 2701 Blast hits to 2684 proteins in 226 species: Archae - 0; Bacteria - 6; Metazoa - 573; Fungi - 420; Plants - 1375; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink). & (reliability: 1196.0) & (original description: no original description)


Gene families : OG_42_0000170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040741-RA
Cluster HCCA clusters: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
442676 No alias amino acid permease 2 0.03 Orthogroups_2024-Update
Bradi1g45180 No alias amino acid permease 8 0.04 Orthogroups_2024-Update
Bradi5g24810 No alias amino acid permease 7 0.02 Orthogroups_2024-Update
Glyma.06G090200 No alias amino acid permease 6 0.05 Orthogroups_2024-Update
HORVU2Hr1G081790.4 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
HORVU6Hr1G071810.2 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Mp6g14130.1 No alias amino acid transporter (AAP) 0.03 Orthogroups_2024-Update
Pp1s107_87V6 No alias amino acid permease 0.02 Orthogroups_2024-Update
Sobic.008G059000.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Solyc01g106800 No alias amino acid transporter 1 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 37 469
No external refs found!