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  5. PSME_00040769-RA

PSME_00040769-RA


Description : (at1g54115 : 124.0) Involved in cation (Na and K) homeostasis.; cation calcium exchanger 4 (CCX4); FUNCTIONS IN: cation:cation antiporter activity; INVOLVED IN: cation transport, cellular cation homeostasis; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation exchanger 9 (TAIR:AT3G14070.1); Has 4016 Blast hits to 3229 proteins in 801 species: Archae - 54; Bacteria - 848; Metazoa - 1841; Fungi - 309; Plants - 226; Viruses - 0; Other Eukaryotes - 738 (source: NCBI BLink). & (reliability: 248.0) & (original description: no original description)


Gene families : OG_42_0000842 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040769-RA
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G340578 No alias calcium exchanger 7 0.02 Orthogroups_2024-Update
Glyma.19G066700 No alias calcium exchanger 7 0.03 Orthogroups_2024-Update
HORVU4Hr1G076630.1 No alias cation 0.02 Orthogroups_2024-Update
Kfl00125_0260 kfl00125_0260_v1.... (at3g14070 : 347.0) Involved in cation (K, Na and Mn)... 0.01 Orthogroups_2024-Update
Sobic.001G240300.1 No alias cation 0.04 Orthogroups_2024-Update
Sopen01g042340 No alias Sodium/calcium exchanger protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 143 291
No external refs found!