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PSME_00040770-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040770-RA
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Brara.H02059.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Potri.004G046700 No alias squamosa promoter binding protein-like 3 0.03 Orthogroups_2024-Update
Potri.015G098900 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
Sobic.002G247800.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Solyc05g012040 No alias Squamosa promoter binding protein 6b 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 2 24
No external refs found!