Description : (at5g19160 : 478.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 11 (TBL11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 956.0) & (original description: no original description)
Gene families : OG_42_0000293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000293_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00040804-RA | |
Cluster | HCCA clusters: Cluster_185 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_37919 | No alias | protein trichome birefringence-like 5 | 0.02 | Orthogroups_2024-Update | |
Pp1s4_66V6 | No alias | unknown [Picea sitchensis] | 0.03 | Orthogroups_2024-Update | |
Sopen05g001120 | No alias | GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000347 | THO complex | IEP | Predicted GO |
CC | GO:0000445 | THO complex part of transcription export complex | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0004620 | phospholipase activity | IEP | Predicted GO |
BP | GO:0006457 | protein folding | IEP | Predicted GO |
BP | GO:0006855 | drug transmembrane transport | IEP | Predicted GO |
BP | GO:0007049 | cell cycle | IEP | Predicted GO |
MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Predicted GO |
MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
MF | GO:0015238 | drug transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015893 | drug transport | IEP | Predicted GO |
CC | GO:0016020 | membrane | IEP | Predicted GO |
MF | GO:0016298 | lipase activity | IEP | Predicted GO |
MF | GO:0042393 | histone binding | IEP | Predicted GO |
MF | GO:0050290 | sphingomyelin phosphodiesterase D activity | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
BP | GO:0051321 | meiotic cell cycle | IEP | Predicted GO |
No external refs found! |