1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00040951-RA

PSME_00040951-RA


Description : (at5g35735 : 325.0) Auxin-responsive family protein; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome b561, eukaryote (InterPro:IPR004877), Uncharacterised conserved protein UCP037471 (InterPro:IPR017214), Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Auxin-responsive family protein (TAIR:AT5G47530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 650.0) & (original description: no original description)


Gene families : OG_42_0000188 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000188_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00040951-RA
Cluster HCCA clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
65529 No alias Auxin-responsive family protein 0.02 Orthogroups_2024-Update
A4A49_27427 No alias cytochrome b561 and domon domain-containing protein 0.03 Orthogroups_2024-Update
Bradi4g34300 No alias Auxin-responsive family protein 0.03 Orthogroups_2024-Update
Brara.A03602.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C04028.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.09G011200 No alias Auxin-responsive family protein 0.04 Orthogroups_2024-Update
Glyma.17G008000 No alias Auxin-responsive family protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G062870.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G071330.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G071370.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00486_0010 kfl00486_0010_v1.1 (at3g61750 : 123.0) Cytochrome b561/ferric reductase... 0.02 Orthogroups_2024-Update
LOC_Os01g67010 No alias expressed protein 0.02 Orthogroups_2024-Update
Mp3g04620.1 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 Orthogroups_2024-Update
Potri.002G222700 No alias Auxin-responsive family protein 0.05 Orthogroups_2024-Update
Potri.014G173600 No alias Cytochrome b561/ferric reductase transmembrane with... 0.03 Orthogroups_2024-Update
Potri.019G096300 No alias Auxin-responsive family protein 0.03 Orthogroups_2024-Update
Pp1s112_142V6 No alias dopamine beta-monooxygenase 0.03 Orthogroups_2024-Update
Pp1s288_14V6 No alias membrane protein 0.02 Orthogroups_2024-Update
Seita.9G506700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G226900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g041910 No alias Auxin induced-like protein (AHRD V3.3 *** A0A0K9P8V5_ZOSMR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
InterPro domains Description Start Stop
IPR005018 DOMON_domain 86 187
IPR006593 Cyt_b561/ferric_Rdtase_TM 207 331
No external refs found!