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  5. PSME_00041150-RA

PSME_00041150-RA


Description : (at4g04450 : 119.0) member of WRKY Transcription Factor; Group II-b; WRKY42; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 31 (TAIR:AT4G22070.1); Has 3599 Blast hits to 3152 proteins in 220 species: Archae - 0; Bacteria - 6; Metazoa - 41; Fungi - 2; Plants - 3474; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). & (reliability: 238.0) & (original description: no original description)


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041150-RA
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
A4A49_07696 No alias putative wrky transcription factor 33 0.02 Orthogroups_2024-Update
A4A49_26487 No alias putative wrky transcription factor 65 0.03 Orthogroups_2024-Update
At1g64000 No alias At1g64000 [Source:UniProtKB/TrEMBL;Acc:Q29PS1] 0.04 Orthogroups_2024-Update
At1g80840 No alias Probable WRKY transcription factor 40... 0.04 Orthogroups_2024-Update
At4g39410 No alias WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80] 0.03 Orthogroups_2024-Update
At5g49520 No alias Probable WRKY transcription factor 48... 0.04 Orthogroups_2024-Update
Bradi1g47690 No alias WRKY family transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi1g63220 No alias WRKY DNA-binding protein 70 0.03 Orthogroups_2024-Update
Bradi2g11170 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Bradi2g18530 No alias WRKY DNA-binding protein 51 0.03 Orthogroups_2024-Update
Bradi2g33540 No alias WRKY DNA-binding protein 50 0.03 Orthogroups_2024-Update
Bradi4g44342 No alias WRKY DNA-binding protein 70 0.04 Orthogroups_2024-Update
Brara.A01631.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.C01543.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F01311.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.F03381.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.H02398.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I00414.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J02121.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G005207 No alias WRKY DNA-binding protein 70 0.03 Orthogroups_2024-Update
GRMZM2G083350 No alias WRKY DNA-binding protein 72 0.02 Orthogroups_2024-Update
GRMZM2G304573 No alias WRKY DNA-binding protein 9 0.02 Orthogroups_2024-Update
Glyma.01G128100 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Glyma.02G010900 No alias WRKY DNA-binding protein 23 0.03 Orthogroups_2024-Update
Glyma.02G112100 No alias WRKY DNA-binding protein 3 0.02 Orthogroups_2024-Update
Glyma.02G232600 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Glyma.03G109100 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.05G123600 No alias WRKY DNA-binding protein 35 0.03 Orthogroups_2024-Update
Glyma.08G218600 No alias WRKY DNA-binding protein 40 0.03 Orthogroups_2024-Update
Glyma.09G244000 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.10G138300 No alias WRKY family transcription factor 0.04 Orthogroups_2024-Update
Glyma.11G163300 No alias WRKY DNA-binding protein 33 0.04 Orthogroups_2024-Update
Glyma.13G310100 No alias WRKY family transcription factor 0.04 Orthogroups_2024-Update
Glyma.14G200200 No alias WRKY DNA-binding protein 33 0.02 Orthogroups_2024-Update
Glyma.15G003300 No alias WRKY DNA-binding protein 40 0.02 Orthogroups_2024-Update
Glyma.15G110300 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.19G254800 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
HORVU0Hr1G012750.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G090190.6 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
HORVU3Hr1G059220.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G056130.2 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os01g43650 No alias WRKY11, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g53100 No alias WRKY32, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g20550 No alias WRKY55, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g05380 No alias WRKY73, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g30400 No alias WRKY90, expressed 0.03 Orthogroups_2024-Update
MA_103616g0010 No alias (at4g22070 : 256.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
MA_126273g0010 No alias (at1g69310 : 166.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_20468g0010 No alias (at1g69310 : 113.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_47307g0010 No alias (at4g04450 : 171.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_6177g0010 No alias (at4g11070 : 114.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
PSME_00001973-RA No alias (at4g04450 : 153.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00024308-RA No alias (at3g01970 : 113.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00028885-RA No alias (at5g15130 : 194.0) member of WRKY Transcription Factor;... 0.06 Orthogroups_2024-Update
PSME_00030013-RA No alias (at2g38470 : 151.0) Member of the plant WRKY... 0.04 Orthogroups_2024-Update
PSME_00032293-RA No alias (at4g01720 : 163.0) member of WRKY Transcription Factor;... 0.05 Orthogroups_2024-Update
PSME_00042021-RA No alias (at4g22070 : 263.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
Potri.002G221600 No alias zinc-dependent activator protein-1 0.04 Orthogroups_2024-Update
Potri.003G182200 No alias WRKY DNA-binding protein 40 0.03 Orthogroups_2024-Update
Potri.014G090700 No alias WRKY DNA-binding protein 43 0.02 Orthogroups_2024-Update
Potri.019G059300 No alias WRKY DNA-binding protein 55 0.03 Orthogroups_2024-Update
Pp1s39_217V6 No alias wrky transcription 0.02 Orthogroups_2024-Update
Seita.5G132800.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.5G306000.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.8G012800.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G174200.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G138400.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G276000.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G068900.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.009G092100.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Solyc01g079360 No alias WRKY transcription factor 37 0.02 Orthogroups_2024-Update
Solyc03g095770 No alias WRKY transcription factor 80 0.04 Orthogroups_2024-Update
Solyc06g070990 No alias WRKY transcription factor 74 0.02 Orthogroups_2024-Update
Solyc07g055280 No alias WRKY transcription factor 78 0.03 Orthogroups_2024-Update
Solyc08g067340 No alias WRKY transcription factor 46 0.03 Orthogroups_2024-Update
Solyc10g084380 No alias WRKY transcription factor 44 0.03 Orthogroups_2024-Update
Sopen08g004130 No alias WRKY DNA -binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003657 WRKY_dom 215 271
No external refs found!