1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00041175-RA

PSME_00041175-RA


Description : (at5g56040 : 212.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat receptor-like protein kinase family protein (TAIR:AT4G26540.1); Has 231331 Blast hits to 125911 proteins in 4380 species: Archae - 141; Bacteria - 23597; Metazoa - 71861; Fungi - 8804; Plants - 101197; Viruses - 340; Other Eukaryotes - 25391 (source: NCBI BLink). & (p93194|rpk1_iponi : 210.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 388.0) & (original description: no original description)


Gene families : OG_42_0002753 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002753_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041175-RA
Cluster HCCA clusters: Cluster_715

Target Alias Description ECC score Gene Family Method Actions
MA_10436129g0010 No alias (at4g13920 : 154.0) receptor like protein 50 (RLP50);... 0.06 Orthogroups_2024-Update
MA_82361g0020 No alias (at3g05660 : 111.0) receptor like protein 33 (RLP33);... 0.04 Orthogroups_2024-Update
PSME_00049161-RA No alias (at4g20140 : 363.0) Encodes GASSHO1 (GSO1), a putative... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 212 267
IPR001611 Leu-rich_rpt 301 357
IPR001611 Leu-rich_rpt 108 129
No external refs found!