1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00041189-RA

PSME_00041189-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0001397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041189-RA
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
MA_29607g0010 No alias (at3g06060 : 154.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
PSME_00006325-RA No alias (at3g06060 : 162.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
PSME_00039498-RA No alias (at5g19200 : 128.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
evm.model.contig_4523.1 No alias (at3g06060 : 90.1) NAD(P)-binding Rossmann-fold... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005137 interleukin-5 receptor binding IEA InterProScan predictions
CC GO:0005576 extracellular region IEA InterProScan predictions
BP GO:0006955 immune response IEA InterProScan predictions
MF GO:0008083 growth factor activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000186 IL-5 49 115
IPR002347 SDR_fam 50 96
No external refs found!