1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00041212-RA

PSME_00041212-RA


Description : "(at3g48520 : 263.0) member of CYP94B; ""cytochrome P450, family 94, subfamily B, polypeptide 3"" (CYP94B3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 94, subfamily B, polypeptide 1 (TAIR:AT5G63450.1); Has 27655 Blast hits to 27536 proteins in 1435 species: Archae - 44; Bacteria - 2616; Metazoa - 10459; Fungi - 5693; Plants - 7745; Viruses - 3; Other Eukaryotes - 1095 (source: NCBI BLink). & (reliability: 526.0) & (original description: no original description)"


Gene families : OG_42_0000018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041212-RA
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Bradi1g75730 No alias cytochrome P450, family 96, subfamily A, polypeptide 10 0.03 Orthogroups_2024-Update
Brara.C02300.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.04 Orthogroups_2024-Update
GRMZM2G123037 No alias cytochrome P450, family 86, subfamily C, polypeptide 1 0.03 Orthogroups_2024-Update
GRMZM2G396248 No alias cytochrome P450, family 94, subfamily C, polypeptide 1 0.05 Orthogroups_2024-Update
HORVU3Hr1G015120.4 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
LOC_Os04g47250 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g05440 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
Mp4g01410.1 No alias Cytochrome P450 704B1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp6g06780.1 No alias Cytochrome P450 704B1 OS=Arabidopsis thaliana... 0.04 Orthogroups_2024-Update
Potri.015G086900 No alias cytochrome P450, family 96, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
Pp1s332_42V6 No alias cytochrome p450 0.03 Orthogroups_2024-Update
Sobic.008G036000.1 No alias jasmonoyl-amino acid carboxylase *(CYP94C) & EC_1.14... 0.03 Orthogroups_2024-Update
Solyc03g111280 No alias Cytochrome P450, putative (AHRD V3.3 *** B9RAH1_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 43 313
No external refs found!