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  5. PSME_00041240-RA

PSME_00041240-RA


Description : (at3g60800 : 421.0) DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT4G22750.1); Has 5091 Blast hits to 5089 proteins in 250 species: Archae - 0; Bacteria - 0; Metazoa - 2186; Fungi - 767; Plants - 823; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink). & (reliability: 842.0) & (original description: no original description)


Gene families : OG_42_0002178 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041240-RA
Cluster HCCA clusters: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
Bradi5g05140 No alias DHHC-type zinc finger family protein 0.02 Orthogroups_2024-Update
Kfl00099_0140 kfl00099_0140_v1.1 (at3g60800 : 249.0) DHHC-type zinc finger family... 0.02 Orthogroups_2024-Update
Pp1s295_2V6 No alias zinc finger (dhhc type) family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0017003 protein-heme linkage IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001594 Palmitoyltrfase_DHHC 131 257
No external refs found!