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  5. Sopen06g009570

Sopen06g009570


Description : Protein of unknown function (DUF 659)


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g009570
Cluster HCCA clusters: Cluster_405

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G117600 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
Glyma.07G169600 No alias hAT dimerisation domain-containing protein / transposase-related 0.03 Orthogroups_2024-Update
LOC_Os07g22590 No alias hAT dimerisation domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00005441-RA No alias (at5g33406 : 120.0) hAT dimerisation domain-containing... 0.02 Orthogroups_2024-Update
PSME_00038047-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Solyc04g025680 No alias No description available 0.04 Orthogroups_2024-Update
Solyc04g039680 No alias No description available 0.03 Orthogroups_2024-Update
Solyc08g021900 No alias No description available 0.03 Orthogroups_2024-Update
Solyc09g047860 No alias HAT transposon superfamily (AHRD V3.3 *-* A0A061G5I4_THECC) 0.04 Orthogroups_2024-Update
Sopen02g004200 No alias hAT family C-terminal dimerisation region 0.03 Orthogroups_2024-Update
Sopen11g018050 No alias Protein of unknown function (DUF 659) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003656 Znf_BED 16 54
IPR007021 DUF659 216 367
IPR008906 HATC_C_dom 582 654
No external refs found!