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  5. PSME_00041322-RA

PSME_00041322-RA


Description : (q40476|erf1_tobac : 120.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (NtERF1) - Nicotiana tabacum (Common tobacco) & (at4g17500 : 116.0) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.; ethylene responsive element binding factor 1 (ERF-1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 2 (TAIR:AT5G47220.1); Has 5773 Blast hits to 5650 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5761; Viruses - 2; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description)


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041322-RA
Cluster HCCA clusters: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
A4A49_24041 No alias ethylene-responsive transcription factor 1a 0.03 Orthogroups_2024-Update
AC209257.4_FG006 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
At1g28360 No alias Ethylene-responsive transcription factor 12... 0.02 Orthogroups_2024-Update
At1g43160 No alias Ethylene-responsive transcription factor RAP2-6... 0.02 Orthogroups_2024-Update
At1g44830 No alias Ethylene-responsive transcription factor ERF014... 0.03 Orthogroups_2024-Update
At2g40220 No alias Ethylene-responsive transcription factor ABI4... 0.02 Orthogroups_2024-Update
At4g11140 No alias Ethylene-responsive transcription factor CRF1... 0.02 Orthogroups_2024-Update
At5g47230 No alias ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9] 0.02 Orthogroups_2024-Update
At5g51990 No alias C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26] 0.02 Orthogroups_2024-Update
At5g61600 No alias Ethylene-responsive transcription factor ERF104... 0.02 Orthogroups_2024-Update
Bradi1g54450 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Brara.I00528.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.I04678.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.K00042.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G267400 No alias ethylene responsive element binding factor 3 0.02 Orthogroups_2024-Update
Glyma.05G015900 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Glyma.10G067000 No alias C-repeat/DRE binding factor 1 0.02 Orthogroups_2024-Update
Glyma.11G014800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G081600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G236500 No alias erf domain protein 9 0.02 Orthogroups_2024-Update
Glyma.16G023800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
MA_10431529g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10433094g0010 No alias (at1g74930 : 123.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_8552524g0010 No alias (q9lw50|erf2_nicsy : 135.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
PSME_00004941-RA No alias (at4g17500 : 94.7) Encodes a member of the ERF (ethylene... 0.05 Orthogroups_2024-Update
PSME_00008357-RA No alias (at5g21960 : 123.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
PSME_00008897-RA No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00026875-RA No alias (at1g01250 : 97.8) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00032588-RA No alias (at4g17490 : 92.8) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00033041-RA No alias (at5g61600 : 121.0) encodes a member of the ERF... 0.06 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00037532-RA No alias (at5g61890 : 129.0) encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00040934-RA No alias (at5g64750 : 100.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00048384-RA No alias (at5g11190 : 113.0) encodes a member of the ERF... 0.06 Orthogroups_2024-Update
PSME_00051697-RA No alias (q40476|erf1_tobac : 102.0) Ethylene-responsive... 0.04 Orthogroups_2024-Update
PSME_00053215-RA No alias (at4g17490 : 92.0) Encodes a member of the ERF (ethylene... 0.05 Orthogroups_2024-Update
PSME_00053842-RA No alias (at5g21960 : 117.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00054473-RA No alias (at5g64750 : 103.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00056166-RA No alias (at5g11590 : 103.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00056344-RA No alias (at2g36450 : 117.0) encodes a member of the DREB... 0.05 Orthogroups_2024-Update
Potri.003G077700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G126100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s13_457V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.01 Orthogroups_2024-Update
Pp1s187_47V6 No alias dna binding 0.02 Orthogroups_2024-Update
Pp1s64_47V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.2G364700.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
Seita.5G348000.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Seita.9G500100.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G324400.2 No alias subgroup ERF-VIII transcription factor 0.01 Orthogroups_2024-Update
Sobic.004G227400.2 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G168000.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Solyc03g026280 No alias CBF 0.02 Orthogroups_2024-Update
Solyc04g014530 No alias Ethylene Response Factor C.2 0.02 Orthogroups_2024-Update
Sopen05g030580 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen06g026100 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 147 193
No external refs found!