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  5. PSME_00041372-RA

PSME_00041372-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000720 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041372-RA
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
PSME_00000070-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00000639-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00009181-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00010264-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00011214-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00023509-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00034815-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00037762-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00039025-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00043880-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00046055-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006751 glutathione catabolic process IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0043171 peptide catabolic process IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 386 453
No external refs found!