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  5. PSME_00041373-RA

PSME_00041373-RA


Description : (at3g25500 : 169.0) Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.; formin homology 1 (AFH1); FUNCTIONS IN: actin binding, protein binding, actin filament binding; INVOLVED IN: actin cytoskeleton organization; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 (formin homology 2) family protein (TAIR:AT2G43800.1); Has 17339 Blast hits to 10806 proteins in 665 species: Archae - 8; Bacteria - 1434; Metazoa - 6069; Fungi - 2556; Plants - 3390; Viruses - 718; Other Eukaryotes - 3164 (source: NCBI BLink). & (reliability: 338.0) & (original description: no original description)


Gene families : OG_42_0000265 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041373-RA
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Bradi2g57650 No alias formin homology 1 0.02 Orthogroups_2024-Update
GRMZM2G114619 No alias Actin-binding FH2 (formin homology 2) family protein 0.02 Orthogroups_2024-Update
Glyma.11G048600 No alias formin homolog 6 0.03 Orthogroups_2024-Update
Glyma.12G102700 No alias formin 3 0.03 Orthogroups_2024-Update
LOC_Os03g10680 No alias formin-like protein 6 precursor, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s156_136V6 No alias fh protein nfh2 0.02 Orthogroups_2024-Update
Sobic.001G203700.1 No alias group-I formin actin filament elongation factor 0.02 Orthogroups_2024-Update
Sobic.002G265200.1 No alias group-I formin actin filament elongation factor 0.02 Orthogroups_2024-Update
Sobic.003G389100.2 No alias group-I formin actin filament elongation factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR015425 FH2_Formin 2 128
No external refs found!