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  5. PSME_00041400-RA

PSME_00041400-RA


Description : (at2g04910 : 122.0) Carbohydrate-binding X8 domain superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: Carbohydrate-binding X8 domain superfamily protein (TAIR:AT5G35740.1); Has 1314 Blast hits to 1266 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1314; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 240.0) & (original description: no original description)


Gene families : OG_42_0000165 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041400-RA

Target Alias Description ECC score Gene Family Method Actions
59691 No alias O-Glycosyl hydrolases family 17 protein 0.06 Orthogroups_2024-Update
A4A49_25680 No alias plasmodesmata callose-binding protein 3 0.02 Orthogroups_2024-Update
At5g08000 No alias glucan endo-1,3-beta-glucosidase-like protein 3... 0.01 Orthogroups_2024-Update
Brara.B03750.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Glyma.07G266700 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G028190.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g50490 No alias X8 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g45450 No alias glucan endo-1,3-beta-glucosidase 12 precursor, putative,... 0.01 Orthogroups_2024-Update
PSME_00038382-RA No alias (at2g30933 : 121.0) Carbohydrate-binding X8 domain... 0.02 Orthogroups_2024-Update
Potri.011G078500 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Orthogroups_2024-Update
Sopen07g024160 No alias X8 domain 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005542 folic acid binding IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR012946 X8 44 115
No external refs found!