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  5. PSME_00041615-RA

PSME_00041615-RA


Description : (at1g15950 : 425.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (p51108|dfra_maize : 206.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (reliability: 850.0) & (original description: no original description)


Gene families : OG_42_0000056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041615-RA
Cluster HCCA clusters: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
135301 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
At1g15950 No alias Cinnamoyl-CoA reductase 1... 0.02 Orthogroups_2024-Update
At1g68540 No alias TKPR2 [Source:UniProtKB/TrEMBL;Acc:A0A178W2A9] 0.03 Orthogroups_2024-Update
At1g76470 No alias NAD(P)-binding Rossmann-fold superfamily protein... 0.02 Orthogroups_2024-Update
At5g19440 No alias At5g19440 [Source:UniProtKB/TrEMBL;Acc:Q29Q34] 0.03 Orthogroups_2024-Update
Bradi1g35730 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Bradi2g44480 No alias dihydroflavonol 4-reductase 0.03 Orthogroups_2024-Update
Brara.B03104.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F01108.1 No alias cinnamoyl-CoA reductase *(CCR) 0.02 Orthogroups_2024-Update
Brara.G03446.1 No alias phaseic acid reductase *(CRL1/2) 0.03 Orthogroups_2024-Update
Brara.I05270.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.J01234.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G050076 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G107076 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G026300 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G320900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G019800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G019900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G003600 No alias cinnamoyl coa reductase 1 0.03 Orthogroups_2024-Update
HORVU4Hr1G012470.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G065330.12 No alias cinnamoyl-CoA reductase *(CCR) 0.03 Orthogroups_2024-Update
HORVU5Hr1G073800.2 No alias phaseic acid reductase *(CRL1/2) 0.03 Orthogroups_2024-Update
HORVU5Hr1G112340.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G089350.2 No alias cinnamoyl-CoA reductase *(CCR) 0.03 Orthogroups_2024-Update
LOC_Os01g61230 No alias dihydroflavonol-4-reductase, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g17500 No alias cinnamoyl-CoA reductase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g34280 No alias cinnamoyl-CoA reductase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g31502 No alias dehydrogenase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g32020 No alias ubiquitin fusion degradation protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_137109g0010 No alias (at1g15950 : 414.0) Encodes a cinnamoyl CoA reductase.... 0.05 Orthogroups_2024-Update
MA_29397g0010 No alias (at1g15950 : 219.0) Encodes a cinnamoyl CoA reductase.... 0.03 Orthogroups_2024-Update
MA_9446650g0010 No alias (at1g15950 : 463.0) Encodes a cinnamoyl CoA reductase.... 0.04 Orthogroups_2024-Update
PSME_00012000-RA No alias (p51108|dfra_maize : 262.0) Dihydroflavonol-4-reductase... 0.04 Orthogroups_2024-Update
PSME_00013605-RA No alias (at2g23910 : 108.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
PSME_00032578-RA No alias (at5g19440 : 209.0) similar to Eucalyptus gunnii alcohol... 0.05 Orthogroups_2024-Update
PSME_00033245-RA No alias (p51110|dfra_vitvi : 328.0) Dihydroflavonol-4-reductase... 0.03 Orthogroups_2024-Update
PSME_00044637-RA No alias (p51110|dfra_vitvi : 322.0) Dihydroflavonol-4-reductase... 0.04 Orthogroups_2024-Update
Potri.001G256400 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.07 Orthogroups_2024-Update
Potri.008G138600 No alias dihydroflavonol 4-reductase-like1 0.02 Orthogroups_2024-Update
Potri.009G052000 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G057700 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G125400 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Pp1s39_342V6 No alias cinnamoyl- reductase 0.04 Orthogroups_2024-Update
Seita.1G062400.1 No alias cinnamoyl-CoA reductase *(CCR) 0.04 Orthogroups_2024-Update
Seita.1G361000.1 No alias cinnamoyl-CoA reductase *(CCR) 0.02 Orthogroups_2024-Update
Seita.4G048300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G212500.1 No alias phaseic acid reductase *(CRL1/2) 0.05 Orthogroups_2024-Update
Seita.5G035700.1 No alias cinnamoyl-CoA reductase *(CCR) 0.02 Orthogroups_2024-Update
Seita.6G105100.1 No alias cinnamoyl-CoA reductase *(CCR) 0.02 Orthogroups_2024-Update
Seita.9G038000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G065600.1 No alias cinnamoyl-CoA reductase *(CCR) 0.04 Orthogroups_2024-Update
Sobic.004G130800.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g008540 No alias Cinnamoyl CoA reductase-like protein (AHRD V1 ***- B9HNY0_POPTR) 0.03 Orthogroups_2024-Update
Solyc01g102730 No alias Cinnamoyl-CoA reductase family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc02g085020 No alias dihydroflavonol 4-reductase 0.04 Orthogroups_2024-Update
Sopen02g029720 No alias NAD dependent epimerase/dehydratase family 0.02 Orthogroups_2024-Update
Sopen03g035840 No alias NAD dependent epimerase/dehydratase family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 6 243
No external refs found!