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  5. PSME_00041660-RA

PSME_00041660-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0002002 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002002_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041660-RA
Cluster HCCA clusters: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
PSME_00010268-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00016152-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00021920-RA No alias (at2g21620 : 110.0) Encodes gene that is induced in... 0.03 Orthogroups_2024-Update
PSME_00033764-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00035872-RA No alias (at2g21620 : 80.1) Encodes gene that is induced in... 0.06 Orthogroups_2024-Update
PSME_00042764-RA No alias (at2g21620 : 95.5) Encodes gene that is induced in... 0.01 Orthogroups_2024-Update
PSME_00043901-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00044135-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!