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  5. PSME_00041689-RA

PSME_00041689-RA


Description : (at1g29860 : 111.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 71 (WRKY71); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group IIc (InterPro:IPR017396); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 28 (TAIR:AT4G18170.1); Has 3523 Blast hits to 3068 proteins in 192 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3507; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). & (reliability: 222.0) & (original description: no original description)


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041689-RA
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AC209050.3_FG003 No alias WRKY DNA-binding protein 40 0.03 Orthogroups_2024-Update
At1g64000 No alias At1g64000 [Source:UniProtKB/TrEMBL;Acc:Q29PS1] 0.02 Orthogroups_2024-Update
At2g40740 No alias WRKY DNA-binding protein 55 [Source:TAIR;Acc:AT2G40740] 0.03 Orthogroups_2024-Update
Bradi1g47690 No alias WRKY family transcription factor family protein 0.03 Orthogroups_2024-Update
Bradi2g11170 No alias WRKY family transcription factor 0.04 Orthogroups_2024-Update
Bradi2g18530 No alias WRKY DNA-binding protein 51 0.06 Orthogroups_2024-Update
Bradi2g22241 No alias WRKY DNA-binding protein 54 0.03 Orthogroups_2024-Update
Bradi3g34850 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Bradi4g19060 No alias WRKY DNA-binding protein 75 0.05 Orthogroups_2024-Update
Bradi4g44342 No alias WRKY DNA-binding protein 70 0.03 Orthogroups_2024-Update
Brara.A00933.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.A01226.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B03501.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E00945.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Brara.J01061.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G040298 No alias WRKY DNA-binding protein 69 0.02 Orthogroups_2024-Update
GRMZM2G083350 No alias WRKY DNA-binding protein 72 0.02 Orthogroups_2024-Update
Glyma.01G128100 No alias WRKY DNA-binding protein 33 0.02 Orthogroups_2024-Update
Glyma.01G224800 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G010900 No alias WRKY DNA-binding protein 23 0.03 Orthogroups_2024-Update
Glyma.03G220800 No alias WRKY DNA-binding protein 23 0.04 Orthogroups_2024-Update
Glyma.04G238300 No alias WRKY DNA-binding protein 30 0.03 Orthogroups_2024-Update
Glyma.05G029000 No alias WRKY DNA-binding protein 72 0.03 Orthogroups_2024-Update
Glyma.05G160800 No alias WRKY DNA-binding protein 65 0.02 Orthogroups_2024-Update
Glyma.05G185400 No alias WRKY DNA-binding protein 13 0.02 Orthogroups_2024-Update
Glyma.06G054500 No alias WRKY DNA-binding protein 50 0.02 Orthogroups_2024-Update
Glyma.06G168400 No alias WRKY DNA-binding protein 75 0.03 Orthogroups_2024-Update
Glyma.08G143400 No alias WRKY DNA-binding protein 13 0.04 Orthogroups_2024-Update
Glyma.09G240000 No alias WRKY DNA-binding protein 72 0.03 Orthogroups_2024-Update
Glyma.09G244000 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.10G138300 No alias WRKY family transcription factor 0.05 Orthogroups_2024-Update
Glyma.14G185800 No alias WRKY DNA-binding protein 70 0.05 Orthogroups_2024-Update
Glyma.16G177000 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.17G042300 No alias WRKY family transcription factor 0.04 Orthogroups_2024-Update
Glyma.18G249502 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.19G254800 No alias WRKY family transcription factor 0.04 Orthogroups_2024-Update
HORVU0Hr1G001430.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
HORVU0Hr1G003340.8 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G080300.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G090130.3 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
HORVU2Hr1G029460.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G069320.3 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G034830.3 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G096420.20 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g40260 No alias WRKY77, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g43560 No alias WRKY34, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g50920 No alias WRKY37, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g40060 No alias WRKY48, expressed 0.02 Orthogroups_2024-Update
MA_10432362g0010 No alias (at1g69310 : 113.0) member of WRKY Transcription Factor;... 0.05 Orthogroups_2024-Update
MA_10432914g0010 No alias (at2g34830 : 207.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_10434976g0010 No alias (at1g69310 : 169.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_11072g0010 No alias (at1g68150 : 82.4) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_138256g0010 No alias (at1g30650 : 163.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
MA_179641g0010 No alias (at1g29860 : 118.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
MA_23415g0010 No alias (at5g26170 : 117.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
MA_496691g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_54954g0010 No alias (at5g26170 : 109.0) member of WRKY Transcription Factor;... 0.05 Orthogroups_2024-Update
MA_6177g0010 No alias (at4g11070 : 114.0) member of WRKY Transcription Factor;... 0.07 Orthogroups_2024-Update
MA_91468g0010 No alias (at4g01720 : 124.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
MA_93790g0010 No alias (at1g29860 : 110.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00008606-RA No alias (at5g56270 : 338.0) WRKY transcription factor 2; WRKY... 0.05 Orthogroups_2024-Update
PSME_00013774-RA No alias (at1g62300 : 180.0) Encodes a transcription factor... 0.05 Orthogroups_2024-Update
PSME_00021156-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00028885-RA No alias (at5g15130 : 194.0) member of WRKY Transcription Factor;... 0.05 Orthogroups_2024-Update
PSME_00030013-RA No alias (at2g38470 : 151.0) Member of the plant WRKY... 0.04 Orthogroups_2024-Update
PSME_00033789-RA No alias (at2g38470 : 152.0) Member of the plant WRKY... 0.02 Orthogroups_2024-Update
PSME_00035861-RA No alias (at3g01970 : 109.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00036210-RA No alias (at1g62300 : 137.0) Encodes a transcription factor... 0.04 Orthogroups_2024-Update
PSME_00037224-RA No alias (at2g38470 : 152.0) Member of the plant WRKY... 0.02 Orthogroups_2024-Update
PSME_00039099-RA No alias (at3g01970 : 111.0) member of WRKY Transcription Factor;... 0.06 Orthogroups_2024-Update
PSME_00040625-RA No alias (at1g62300 : 128.0) Encodes a transcription factor... 0.04 Orthogroups_2024-Update
PSME_00042021-RA No alias (at4g22070 : 263.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00042944-RA No alias (at5g26170 : 128.0) member of WRKY Transcription Factor;... 0.06 Orthogroups_2024-Update
PSME_00047222-RA No alias (at4g04450 : 178.0) member of WRKY Transcription Factor;... 0.05 Orthogroups_2024-Update
PSME_00051212-RA No alias (at4g11070 : 110.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00052260-RA No alias (at5g26170 : 117.0) member of WRKY Transcription Factor;... 0.06 Orthogroups_2024-Update
Potri.004G007500 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Potri.015G099200 No alias WRKY DNA-binding protein 75 0.02 Orthogroups_2024-Update
Potri.016G128300 No alias WRKY DNA-binding protein 33 0.02 Orthogroups_2024-Update
Potri.016G137900 No alias WRKY DNA-binding protein 70 0.04 Orthogroups_2024-Update
Potri.017G079500 No alias WRKY DNA-binding protein 72 0.03 Orthogroups_2024-Update
Pp1s35_401V6 No alias wrky transcription 0.03 Orthogroups_2024-Update
Seita.2G206100.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Seita.3G139400.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G206900.1 No alias transcription factor *(WRKY33) & WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Seita.5G132800.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Seita.5G306000.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.8G012800.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G085700.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G421700.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G083000.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G381300.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G174200.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G202800.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G138400.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.003G248400.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G068900.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G092100.1 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
Solyc01g079260 No alias WRKY transcription factor 23 0.02 Orthogroups_2024-Update
Solyc06g070990 No alias WRKY transcription factor 74 0.03 Orthogroups_2024-Update
Solyc12g011200 No alias WRKY transcription factor 28 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003856 3-dehydroquinate synthase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR003657 WRKY_dom 171 228
IPR003657 WRKY_dom 270 310
No external refs found!