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  5. PSME_00041851-RA

PSME_00041851-RA


Description : (at1g21910 : 102.0) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.; Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G77640.1); Has 6386 Blast hits to 5661 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 9; Plants - 5687; Viruses - 2; Other Eukaryotes - 589 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041851-RA
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
69413 No alias DREB and EAR motif protein 3 0.04 Orthogroups_2024-Update
A4A49_20472 No alias ethylene-responsive transcription factor 13 0.02 Orthogroups_2024-Update
A4A49_20932 No alias ethylene-responsive transcription factor erf114 0.05 Orthogroups_2024-Update
A4A49_21042 No alias ethylene-responsive transcription factor 4 0.04 Orthogroups_2024-Update
A4A49_23010 No alias ethylene-responsive transcription factor 2 0.03 Orthogroups_2024-Update
A4A49_24041 No alias ethylene-responsive transcription factor 1a 0.02 Orthogroups_2024-Update
A4A49_36078 No alias ethylene-responsive transcription factor 5 0.03 Orthogroups_2024-Update
AC198403.3_FG001 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
At1g12610 No alias Dehydration-responsive element-binding protein 1F... 0.03 Orthogroups_2024-Update
At1g21910 No alias DREB26 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Q9] 0.04 Orthogroups_2024-Update
At1g28360 No alias Ethylene-responsive transcription factor 12... 0.02 Orthogroups_2024-Update
At1g33760 No alias Ethylene-responsive transcription factor ERF022... 0.04 Orthogroups_2024-Update
At1g72360 No alias Integrase-type DNA-binding superfamily protein... 0.05 Orthogroups_2024-Update
At1g77640 No alias Ethylene-responsive transcription factor ERF013... 0.04 Orthogroups_2024-Update
At2g36450 No alias Ethylene-responsive transcription factor ERF024... 0.05 Orthogroups_2024-Update
At3g23230 No alias Ethylene-responsive transcription factor ERF098... 0.07 Orthogroups_2024-Update
At4g11140 No alias Ethylene-responsive transcription factor CRF1... 0.05 Orthogroups_2024-Update
At4g34410 No alias Ethylene-responsive transcription factor ERF109... 0.03 Orthogroups_2024-Update
At5g51190 No alias Ethylene-responsive transcription factor ERF105... 0.03 Orthogroups_2024-Update
At5g61890 No alias Ethylene-responsive transcription factor ERF114... 0.02 Orthogroups_2024-Update
Bradi1g36590 No alias Integrase-type DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
Bradi3g06562 No alias ethylene responsive element binding factor 3 0.03 Orthogroups_2024-Update
Brara.C00560.1 No alias subgroup ERF-X transcription factor 0.04 Orthogroups_2024-Update
Brara.H01995.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.H01997.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.I00861.1 No alias subgroup ERF-II-DEAR transcription factor 0.04 Orthogroups_2024-Update
Brara.I01789.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.J00420.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.J02098.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Brara.J02251.1 No alias cutin and suberin biosynthesis transcription factor... 0.03 Orthogroups_2024-Update
Cre14.g620500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G084264 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G103085 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G434203 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.01G231200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G017300 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Glyma.03G138900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G015900 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.07G017300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G053600 No alias DREB and EAR motif protein 2 0.03 Orthogroups_2024-Update
Glyma.13G236500 No alias erf domain protein 9 0.03 Orthogroups_2024-Update
Glyma.15G004200 No alias Integrase-type DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
Glyma.15G095600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G164800 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.17G124100 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Glyma.19G035500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G192400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G253100 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Glyma.20G070100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G197000 No alias Integrase-type DNA-binding superfamily protein 0.07 Orthogroups_2024-Update
Glyma.20G203500 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g43970 No alias AP2 domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os09g39850 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10432141g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_10433310g0010 No alias (at5g11590 : 108.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_13408g0010 No alias (at1g21910 : 95.9) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_201698g0010 No alias (at5g11590 : 124.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_288689g0010 No alias (at1g01250 : 120.0) encodes a member of the DREB... 0.05 Orthogroups_2024-Update
MA_3405g0010 No alias (q40476|erf1_tobac : 120.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_40338g0010 No alias (at1g21910 : 84.7) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_42369g0010 No alias (at5g07580 : 93.2) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
MA_5629699g0010 No alias (at5g21960 : 89.0) encodes a member of the DREB... 0.07 Orthogroups_2024-Update
MA_65877g0010 No alias (at3g16280 : 101.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_7166g0010 No alias (at3g60490 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_81029g0010 No alias (q9sxs8|erf3_tobac : 95.1) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_891091g0010 No alias (at4g17500 : 92.0) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
MA_900190g0010 No alias (at1g01250 : 124.0) encodes a member of the DREB... 0.07 Orthogroups_2024-Update
MA_922309g0010 No alias (at4g17500 : 92.0) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_9294379g0010 No alias (at5g11590 : 120.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_94228g0010 No alias (at5g25190 : 160.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
MA_97319g0010 No alias (at3g16280 : 127.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00004941-RA No alias (at4g17500 : 94.7) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00005184-RA No alias (q40479|erf2_tobac : 141.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
PSME_00005185-RA No alias (at4g17500 : 105.0) Encodes a member of the ERF... 0.06 Orthogroups_2024-Update
PSME_00007285-RA No alias (at5g50080 : 84.0) encodes a member of the ERF (ethylene... 0.05 Orthogroups_2024-Update
PSME_00008891-RA No alias (at4g17500 : 93.6) Encodes a member of the ERF (ethylene... 0.05 Orthogroups_2024-Update
PSME_00022946-RA No alias (at5g61890 : 105.0) encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00033041-RA No alias (at5g61600 : 121.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.05 Orthogroups_2024-Update
PSME_00050761-RA No alias (at1g15360 : 129.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.05 Orthogroups_2024-Update
PSME_00051697-RA No alias (q40476|erf1_tobac : 102.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
PSME_00053842-RA No alias (at5g21960 : 117.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00055510-RA No alias (at1g19210 : 129.0) encodes a member of the DREB... 0.05 Orthogroups_2024-Update
Potri.003G077700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G220200 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Potri.007G138100 No alias erf domain protein 9 0.03 Orthogroups_2024-Update
Potri.014G046900 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Potri.014G055700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G088000 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Pp1s127_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s132_34V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.07 Orthogroups_2024-Update
Pp1s1_34V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s204_42V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s233_111V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s31_112V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s38_262V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s60_148V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s6_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.5G320400.1 No alias subgroup ERF-IX transcription factor 0.06 Orthogroups_2024-Update
Seita.5G348000.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Seita.9G323300.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G169400.2 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
Sobic.001G481600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G260800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G269100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G350500.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.04 Orthogroups_2024-Update
Sobic.004G158901.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G227400.2 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G283201.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G308900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G168100.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G184800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G156700.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G181500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G141500.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.04 Orthogroups_2024-Update
Sobic.009G238500.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G016500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g077360 No alias Ethylene Response Factor B.2 0.05 Orthogroups_2024-Update
Solyc04g014530 No alias Ethylene Response Factor C.2 0.03 Orthogroups_2024-Update
Solyc07g042230 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.08 Orthogroups_2024-Update
Solyc10g006130 No alias EAR motif SlERF36 0.04 Orthogroups_2024-Update
Sopen03g005150 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen05g030590 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen09g032860 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 46 95
No external refs found!