PSME_00041932-RA

Description : no hits & (original description: no original description)

Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00041932-RA
Cluster	HCCA clusters: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
A4A49_41488	No alias	e3 ubiquitin-protein ligase rduf1	0.02	Orthogroups_2024-Update
Glyma.14G105900	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os11g04680	No alias	zinc finger, C3HC4 type domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os11g37230	No alias	zinc finger, C3HC4 type domain containing protein, expressed	0.02	Orthogroups_2024-Update
Potri.002G083001	No alias	Zinc finger, C3HC4 type (RING finger) family protein	0.02	Orthogroups_2024-Update
Potri.005G062400	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G086500	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
Seita.1G332400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003871	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008172	S-methyltransferase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0042085	5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	256	297

External Links

No external refs found!