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  5. PSME_00041945-RA

PSME_00041945-RA


Description : (q8w013|comt1_catro : 154.0) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68) (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (at5g54160 : 152.0) A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3í-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3í-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase; O-methyltransferase 1 (OMT1); FUNCTIONS IN: myricetin 3'-O-methyltransferase activity, quercetin 3-O-methyltransferase activity, caffeate O-methyltransferase activity; INVOLVED IN: lignin biosynthetic process, flavonol biosynthetic process; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G77520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)


Gene families : OG_42_0000016 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041945-RA
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
A4A49_32756 No alias trans-resveratrol di-o-methyltransferase 0.02 Orthogroups_2024-Update
A4A49_41648 No alias trans-resveratrol di-o-methyltransferase 0.02 Orthogroups_2024-Update
Bradi1g47030 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Brara.F03756.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Brara.G02172.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Brara.G03470.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Brara.J00896.1 No alias caffeic acid O-methyltransferase *(COMT) & EC_2.1... 0.03 Orthogroups_2024-Update
Cre03.g148800 No alias O-methyltransferase family protein 0.01 Orthogroups_2024-Update
GRMZM2G106172 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.06G137300 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Glyma.06G295700 No alias O-methyltransferase 1 0.03 Orthogroups_2024-Update
Glyma.14G201100 No alias O-methyltransferase family protein 0.02 Orthogroups_2024-Update
Glyma.18G267500 No alias O-methyltransferase family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G117710.10 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
LOC_Os12g25870 No alias O-methyltransferase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10375504g0010 No alias (at5g54160 : 145.0) A caffeic acid/5-hydroxyferulic acid... 0.04 Orthogroups_2024-Update
MA_10426470g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_165197g0010 No alias (q8w013|comt1_catro : 372.0) Caffeic acid... 0.04 Orthogroups_2024-Update
MA_1665780g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_5226589g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_7849761g0010 No alias (at5g54160 : 191.0) A caffeic acid/5-hydroxyferulic acid... 0.03 Orthogroups_2024-Update
MA_8268940g0010 No alias (q8w013|comt1_catro : 180.0) Caffeic acid... 0.03 Orthogroups_2024-Update
MA_86945g0010 No alias (at5g54160 : 94.7) A caffeic acid/5-hydroxyferulic acid... 0.05 Orthogroups_2024-Update
MA_9917746g0010 No alias (q9fqy8|comt1_capan : 178.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00006686-RA No alias (q9fqy8|comt1_capan : 349.0) Caffeic acid... 0.03 Orthogroups_2024-Update
PSME_00008876-RA No alias (p93324|chomt_medsa : 161.0) Isoliquiritigenin... 0.02 Orthogroups_2024-Update
PSME_00015141-RA No alias (q8w013|comt1_catro : 194.0) Caffeic acid... 0.05 Orthogroups_2024-Update
PSME_00016835-RA No alias (p28002|comt1_medsa : 153.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00023722-RA No alias (p28002|comt1_medsa : 233.0) Caffeic acid... 0.05 Orthogroups_2024-Update
PSME_00051481-RA No alias (q8w013|comt1_catro : 234.0) Caffeic acid... 0.05 Orthogroups_2024-Update
PSME_00052449-RA No alias (q8w013|comt1_catro : 208.0) Caffeic acid... 0.04 Orthogroups_2024-Update
PSME_00052626-RA No alias (p28002|comt1_medsa : 204.0) Caffeic acid... 0.04 Orthogroups_2024-Update
Seita.5G331100.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Sobic.007G074800.1 No alias EC_2.1 transferase transferring one-carbon group 0.02 Orthogroups_2024-Update
Sobic.008G061401.1 No alias EC_2.1 transferase transferring one-carbon group 0.03 Orthogroups_2024-Update
Solyc01g068550 No alias No description available 0.02 Orthogroups_2024-Update
Solyc06g064510 No alias O-methyltransferase (AHRD V3.3 *** A0A1B4Z3W3_9ROSA) 0.02 Orthogroups_2024-Update
Solyc12g041960 No alias O-methyltransferase (AHRD V3.3 *** A0A1B4Z3W3_9ROSA) 0.02 Orthogroups_2024-Update
Sopen01g053940 No alias O-methyltransferase 0.02 Orthogroups_2024-Update
Sopen06g020340 No alias O-methyltransferase 0.02 Orthogroups_2024-Update
Sopen06g034820 No alias O-methyltransferase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR001077 O_MeTrfase_2 99 291
No external refs found!