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  5. PSME_00041981-RA

PSME_00041981-RA


Description : (at1g51860 : 182.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: root hair specific 6 (TAIR:AT1G51880.1); Has 130458 Blast hits to 118907 proteins in 4509 species: Archae - 103; Bacteria - 13378; Metazoa - 43517; Fungi - 9721; Plants - 46311; Viruses - 360; Other Eukaryotes - 17068 (source: NCBI BLink). & (q8lkz1|nork_pea : 137.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 354.0) & (original description: no original description)


Gene families : OG_42_0000556 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041981-RA
Cluster HCCA clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
PSME_00005011-RA No alias (at2g37050 : 250.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00006358-RA No alias (at5g48740 : 220.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00009723-RA No alias (at5g48740 : 483.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00015669-RA No alias (at3g21340 : 439.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00017223-RA No alias (at5g48740 : 268.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00026297-RA No alias (at5g48740 : 458.0) Leucine-rich repeat protein kinase... 0.02 Orthogroups_2024-Update
PSME_00053399-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR024788 Malectin-like_Carb-bd_dom 36 361
No external refs found!