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  5. PSME_00042024-RA

PSME_00042024-RA


Description : (at4g29260 : 131.0) HAD superfamily, subfamily IIIB acid phosphatase ; FUNCTIONS IN: acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase (Class B) (InterPro:IPR005519), Vegetative storage protein/acid phosphatase (InterPro:IPR014403), Acid phosphatase, plant (InterPro:IPR010028); BEST Arabidopsis thaliana protein match is: HAD superfamily, subfamily IIIB acid phosphatase (TAIR:AT4G29270.1); Has 713 Blast hits to 710 proteins in 181 species: Archae - 0; Bacteria - 300; Metazoa - 2; Fungi - 0; Plants - 366; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). & (p15490|vspa_soybn : 106.0) Stem 28 kDa glycoprotein precursor (Vegetative storage protein A) - Glycine max (Soybean) & (reliability: 262.0) & (original description: no original description)


Gene families : OG_42_0000287 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000287_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042024-RA
Cluster HCCA clusters: Cluster_751

Target Alias Description ECC score Gene Family Method Actions
405140 No alias HAD superfamily, subfamily IIIB acid phosphatase 0.02 Orthogroups_2024-Update
A4A49_15231 No alias acid phosphatase 1 0.01 Orthogroups_2024-Update
Brara.F03771.1 No alias acid phosphatase storage protein 0.02 Orthogroups_2024-Update
GRMZM2G001508 No alias HAD superfamily, subfamily IIIB acid phosphatase 0.03 Orthogroups_2024-Update
Glyma.07G014500 No alias HAD superfamily, subfamily IIIB acid phosphatase 0.04 Orthogroups_2024-Update
LOC_Os05g09680 No alias acid phosphatase family, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s115_153V6 No alias acid phosphatase 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR005519 Acid_phosphat_B-like 4 128
No external refs found!