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  5. PSME_00042064-RA

PSME_00042064-RA


Description : (p20026|myb1_horvu : 274.0) Myb-related protein Hv1 - Hordeum vulgare (Barley) & (at4g38620 : 267.0) Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.; myb domain protein 4 (MYB4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 32 (TAIR:AT4G34990.1); Has 9208 Blast hits to 8453 proteins in 515 species: Archae - 0; Bacteria - 0; Metazoa - 855; Fungi - 510; Plants - 6018; Viruses - 3; Other Eukaryotes - 1822 (source: NCBI BLink). & (reliability: 534.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042064-RA
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
84369 No alias myb domain protein 97 0.03 Orthogroups_2024-Update
A4A49_01152 No alias transcription factor myb36 0.02 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.01 Orthogroups_2024-Update
A4A49_20993 No alias transcription factor myb39 0.01 Orthogroups_2024-Update
A4A49_26356 No alias transcription factor myb21 0.01 Orthogroups_2024-Update
A4A49_27195 No alias myb-related protein pp2 0.02 Orthogroups_2024-Update
A4A49_33530 No alias transcription factor myb26 0.01 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.02 Orthogroups_2024-Update
A4A49_38619 No alias transcription factor myb86 0.01 Orthogroups_2024-Update
At2g26960 No alias Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1] 0.01 Orthogroups_2024-Update
At3g11440 No alias Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5] 0.01 Orthogroups_2024-Update
At3g13540 No alias MYB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAR4] 0.04 Orthogroups_2024-Update
At3g28470 No alias Transcription factor MYB35... 0.03 Orthogroups_2024-Update
At3g49690 No alias RAX3 [Source:UniProtKB/TrEMBL;Acc:A0A178VK29] 0.04 Orthogroups_2024-Update
At4g13480 No alias Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9] 0.02 Orthogroups_2024-Update
At4g21440 No alias Transcription factor MYB102... 0.03 Orthogroups_2024-Update
At4g38620 No alias Transcription repressor MYB4... 0.01 Orthogroups_2024-Update
At5g12870 No alias Transcription factor MYB46... 0.01 Orthogroups_2024-Update
At5g52260 No alias MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9LTJ5] 0.01 Orthogroups_2024-Update
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.01 Orthogroups_2024-Update
Bradi2g04252 No alias myb domain protein 50 0.01 Orthogroups_2024-Update
Bradi3g17165 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Bradi3g42350 No alias myb domain protein 7 0.01 Orthogroups_2024-Update
Bradi3g49190 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Bradi5g16672 No alias myb domain protein 19 0.05 Orthogroups_2024-Update
Brara.A01176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.01 Orthogroups_2024-Update
Brara.A01271.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Brara.A01549.1 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.01 Orthogroups_2024-Update
Brara.B00568.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.01 Orthogroups_2024-Update
Brara.B03345.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Brara.B03395.1 No alias MYB class-R2R3 transcription factor 0.01 Orthogroups_2024-Update
Brara.C03910.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03164.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Brara.I01264.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.I01367.1 No alias MYB class-R2R3 transcription factor 0.05 Orthogroups_2024-Update
Brara.I02176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G028054 No alias myb domain protein 65 0.07 Orthogroups_2024-Update
GRMZM2G057027 No alias myb domain protein 12 0.01 Orthogroups_2024-Update
GRMZM2G084799 No alias myb domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G106558 No alias myb domain protein 43 0.04 Orthogroups_2024-Update
GRMZM2G496770 No alias myb domain protein 19 0.01 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.02G005600 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Glyma.02G110200 No alias myb domain protein 16 0.01 Orthogroups_2024-Update
Glyma.06G300400 No alias myb domain protein 74 0.01 Orthogroups_2024-Update
Glyma.10G191000 No alias myb domain protein 305 0.02 Orthogroups_2024-Update
Glyma.11G009400 No alias myb domain protein 107 0.02 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.11G194100 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.12G032200 No alias myb domain protein 32 0.02 Orthogroups_2024-Update
Glyma.12G104500 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Glyma.12G104800 No alias myb domain protein 14 0.02 Orthogroups_2024-Update
Glyma.12G106400 No alias MYB-like 102 0.01 Orthogroups_2024-Update
Glyma.12G218200 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Glyma.13G303200 No alias myb domain protein 14 0.01 Orthogroups_2024-Update
Glyma.16G007200 No alias myb domain protein 4 0.01 Orthogroups_2024-Update
Glyma.16G063700 No alias myb domain protein 40 0.03 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.04 Orthogroups_2024-Update
Glyma.17G158000 No alias myb domain protein 84 0.01 Orthogroups_2024-Update
Glyma.18G095600 No alias myb domain protein 101 0.08 Orthogroups_2024-Update
Glyma.19G248100 No alias myb domain protein 15 0.02 Orthogroups_2024-Update
Glyma.19G257400 No alias myb domain protein 4 0.01 Orthogroups_2024-Update
Glyma.20G032900 No alias myb domain protein 106 0.02 Orthogroups_2024-Update
Glyma.20G184100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
HORVU3Hr1G082210.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g03720 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g51260 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g74410 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os04g50770 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g04210 No alias MYB family transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os09g26170 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434028g0010 No alias (at1g68320 : 180.0) putative transcription factor:... 0.06 Orthogroups_2024-Update
MA_121533g0010 No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
MA_139924g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.05 Orthogroups_2024-Update
MA_1589g0010 No alias (at1g63910 : 241.0) member of MYB3R- and R2R3- type MYB-... 0.01 Orthogroups_2024-Update
MA_190973g0010 No alias (p20026|myb1_horvu : 239.0) Myb-related protein Hv1 -... 0.01 Orthogroups_2024-Update
MA_20462g0010 No alias (at2g32460 : 219.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
MA_3665g0010 No alias (at5g26660 : 238.0) a MYB gene encodes a transcriptional... 0.02 Orthogroups_2024-Update
MA_53373g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
MA_62361g0010 No alias (at1g66230 : 237.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
MA_74671g0010 No alias (p20025|myb38_maize : 203.0) Myb-related protein Zm38 -... 0.01 Orthogroups_2024-Update
PSME_00010370-RA No alias (at5g62470 : 192.0) Encodes a R2R3 type Myb... 0.03 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.01 Orthogroups_2024-Update
PSME_00021697-RA No alias (at5g15310 : 302.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00022392-RA No alias (at3g13540 : 238.0) Encodes a member of the MYB family... 0.06 Orthogroups_2024-Update
PSME_00026136-RA No alias "(at2g47460 : 219.0) ""MYB12 belongs to subgroup 7 of... 0.02 Orthogroups_2024-Update
PSME_00028766-RA No alias (at3g01140 : 277.0) Encodes a MIXTA-like MYB gene NOECK... 0.03 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.01 Orthogroups_2024-Update
PSME_00043807-RA No alias (at1g09540 : 265.0) Encodes putative transcription... 0.05 Orthogroups_2024-Update
PSME_00044287-RA No alias (at4g05100 : 216.0) Member of the R2R3 factor gene... 0.01 Orthogroups_2024-Update
PSME_00050182-RA No alias (p10290|mybc_maize : 191.0) Anthocyanin regulatory C1... 0.01 Orthogroups_2024-Update
PSME_00050855-RA No alias "(at2g47460 : 188.0) ""MYB12 belongs to subgroup 7 of... 0.11 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.01 Orthogroups_2024-Update
PSME_00051403-RA No alias (at1g22640 : 162.0) MYB-type transcription factor (MYB3)... 0.01 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.01 Orthogroups_2024-Update
PSME_00051920-RA No alias (at5g57620 : 234.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00052494-RA No alias (q7xbh4|myb4_orysa : 219.0) Myb-related protein Myb4... 0.01 Orthogroups_2024-Update
PSME_00052652-RA No alias (p20025|myb38_maize : 250.0) Myb-related protein Zm38 -... 0.01 Orthogroups_2024-Update
Potri.001G005100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.005G001600 No alias myb domain protein 61 0.01 Orthogroups_2024-Update
Potri.006G234200 No alias myb domain protein 68 0.01 Orthogroups_2024-Update
Potri.008G122100 No alias myb domain protein 62 0.01 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.01 Orthogroups_2024-Update
Potri.010G174500 No alias myb domain protein 67 0.01 Orthogroups_2024-Update
Potri.011G041600 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Potri.013G149200 No alias myb domain protein 14 0.02 Orthogroups_2024-Update
Potri.015G041100 No alias myb domain protein 3 0.03 Orthogroups_2024-Update
Potri.015G143500 No alias myb domain protein 17 0.01 Orthogroups_2024-Update
Potri.017G099500 No alias myb domain protein 121 0.01 Orthogroups_2024-Update
Potri.019G036400 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.019G045900 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
Potri.019G118900 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Pp1s277_14V6 No alias myb55 (myb domain protein 55) dna binding transcription factor 0.02 Orthogroups_2024-Update
Pp1s46_302V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.2G400600.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.05 Orthogroups_2024-Update
Seita.3G055800.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Seita.5G028900.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.05 Orthogroups_2024-Update
Seita.6G154200.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.7G132600.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.01 Orthogroups_2024-Update
Seita.8G237700.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G368500.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G232800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G274000.1 No alias transcriptional regulator *(MYB26) & MYB class-R2R3... 0.01 Orthogroups_2024-Update
Sobic.004G011100.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.03 Orthogroups_2024-Update
Sobic.004G191800.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.01 Orthogroups_2024-Update
Sobic.008G020300.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.05 Orthogroups_2024-Update
Sobic.009G032000.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.01 Orthogroups_2024-Update
Solyc05g008250 No alias R2R3MYB transcription factor 76 0.02 Orthogroups_2024-Update
Solyc05g053330 No alias MYB transcription factor (AHRD V3.3 *** Q39550_CRAPL) 0.02 Orthogroups_2024-Update
Solyc06g005330 No alias R2R3MYB transcription factor 59 0.01 Orthogroups_2024-Update
Solyc10g055410 No alias R2R3MYB transcription factor 32 0.01 Orthogroups_2024-Update
Solyc11g073120 No alias R2R3MYB transcription factor 58 0.01 Orthogroups_2024-Update
Sopen01g004560 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen01g023280 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen02g016480 No alias Myb-like DNA-binding domain 0.01 Orthogroups_2024-Update
Sopen02g033980 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g031840 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g001300 No alias Myb-like DNA-binding domain 0.01 Orthogroups_2024-Update
Sopen06g031320 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen07g002850 No alias Myb-like DNA-binding domain 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!