1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00042083-RA

PSME_00042083-RA


Description : (at4g38660 : 281.0) Pathogenesis-related thaumatin superfamily protein; CONTAINS InterPro DOMAIN/s: Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: THAUMATIN-LIKE PROTEIN 1 (TAIR:AT4G24180.1); Has 1636 Blast hits to 1618 proteins in 187 species: Archae - 0; Bacteria - 43; Metazoa - 60; Fungi - 87; Plants - 1419; Viruses - 4; Other Eukaryotes - 23 (source: NCBI BLink). & (p83332|tlp1_prupe : 253.0) Thaumatin-like protein 1 precursor (PpAZ44) - Prunus persica (Peach) & (reliability: 562.0) & (original description: no original description)


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042083-RA
Cluster HCCA clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_13514 No alias pathogenesis-related protein 5 0.02 Orthogroups_2024-Update
A4A49_29331 No alias thaumatin-like protein 0.03 Orthogroups_2024-Update
At1g77700 No alias Pathogenesis-related thaumatin superfamily protein... 0.03 Orthogroups_2024-Update
At2g17860 No alias Pathogenesis-related thaumatin superfamily protein... 0.03 Orthogroups_2024-Update
Brara.G03322.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G038846 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G012050.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Kfl00084_0170 kfl00084_0170_v1.... (at1g20030 : 184.0) Pathogenesis-related thaumatin... 0.01 Orthogroups_2024-Update
MA_10433421g0010 No alias (at5g40020 : 249.0) Pathogenesis-related thaumatin... 0.04 Orthogroups_2024-Update
MA_133864g0010 No alias (at4g36010 : 257.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
Mp2g01690.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Mp2g24470.1 No alias Thaumatin-like protein OS=Olea europaea... 0.02 Orthogroups_2024-Update
PSME_00045279-RA No alias (at1g19320 : 311.0) Pathogenesis-related thaumatin... 0.02 Orthogroups_2024-Update
PSME_00054893-RA No alias (at1g19320 : 169.0) Pathogenesis-related thaumatin... 0.02 Orthogroups_2024-Update
Potri.001G107700 No alias osmotin 34 0.03 Orthogroups_2024-Update
Potri.002G087100 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G112700 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Potri.012G004800 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G039200 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G075500 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Solyc02g083790 No alias Pathogenesis-related thaumatin family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen01g033850 No alias Thaumatin family 0.04 Orthogroups_2024-Update
Sopen01g053380 No alias Thaumatin family 0.03 Orthogroups_2024-Update
Sopen04g035170 No alias Thaumatin family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006754 ATP biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predicted GO
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predicted GO
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Predicted GO
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Predicted GO
BP GO:0009260 ribonucleotide biosynthetic process IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
BP GO:0046034 ATP metabolic process IEP Predicted GO
BP GO:0046390 ribose phosphate biosynthetic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 31 242
No external refs found!