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  5. PSME_00042087-RA

PSME_00042087-RA


Description : (at1g19715 : 295.0) Mannose-binding lectin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G73040.1). & (reliability: 590.0) & (original description: no original description)


Gene families : OG_42_0000123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042087-RA
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Brara.F00218.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00188.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G170625 No alias Mannose-binding lectin superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os10g18820 No alias dirigent, putative, expressed 0.02 Orthogroups_2024-Update
Seita.9G225500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G313900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen04g034000 No alias Jacalin-like lectin domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 26 157
IPR001229 Jacalin-like_lectin_dom 343 474
IPR001229 Jacalin-like_lectin_dom 182 312
No external refs found!