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  5. PSME_00042171-RA

PSME_00042171-RA


Description : (at5g22860 : 196.0) Serine carboxypeptidase S28 family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S28 (InterPro:IPR008758); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24280.1); Has 1206 Blast hits to 1180 proteins in 169 species: Archae - 0; Bacteria - 11; Metazoa - 595; Fungi - 183; Plants - 236; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). & (reliability: 392.0) & (original description: no original description)


Gene families : OG_42_0009033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042171-RA
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G008670.1 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA InterProScan predictions
MF GO:0008236 serine-type peptidase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008758 Peptidase_S28 155 323
IPR008758 Peptidase_S28 82 135
No external refs found!