PSME_00042187-RA

Description : (at2g24130 : 489.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (p93194|rpk1_iponi : 310.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 978.0) & (original description: no original description)

Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00042187-RA
Cluster	HCCA clusters: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
425288	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Orthogroups_2024-Update
425291	No alias	Leucine-rich repeat transmembrane protein kinase	0.03	Orthogroups_2024-Update
A4A49_26079	No alias	putative lrr receptor-like serinethreonine-protein kinase	0.03	Orthogroups_2024-Update
At1g34290	No alias	Receptor-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID2]	0.03	Orthogroups_2024-Update
Bradi1g47130	No alias	Leucine-rich receptor-like protein kinase family protein	0.04	Orthogroups_2024-Update
Bradi1g72572	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
GRMZM2G084248	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
GRMZM2G360219	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
Glyma.07G155800	No alias	Leucine-rich repeat protein kinase family protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G064200.11	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
LOC_Os04g15600	No alias	receptor kinase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g07140	No alias	receptor kinase, putative, expressed	0.03	Orthogroups_2024-Update
MA_125058g0020	No alias	no hits & (original description: no original description)	0.07	Orthogroups_2024-Update
MA_362112g0010	No alias	(at5g20480 : 107.0) Encodes a predicted leucine-rich...	0.03	Orthogroups_2024-Update
MA_38414g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00016740-RA	No alias	(at4g20140 : 524.0) Encodes GASSHO1 (GSO1), a putative...	0.04	Orthogroups_2024-Update
PSME_00016956-RA	No alias	(at3g47090 : 353.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00021673-RA	No alias	(at4g20140 : 410.0) Encodes GASSHO1 (GSO1), a putative...	0.05	Orthogroups_2024-Update
PSME_00024881-RA	No alias	(at3g47110 : 605.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00027031-RA	No alias	(at3g47570 : 470.0) Leucine-rich repeat protein kinase...	0.09	Orthogroups_2024-Update
PSME_00031122-RA	No alias	(at5g46330 : 295.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
PSME_00032810-RA	No alias	(at5g46330 : 206.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00040390-RA	No alias	(at4g20140 : 445.0) Encodes GASSHO1 (GSO1), a putative...	0.1	Orthogroups_2024-Update
PSME_00042483-RA	No alias	(at3g47570 : 568.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00044449-RA	No alias	(at5g20480 : 591.0) Encodes a predicted leucine-rich...	0.05	Orthogroups_2024-Update
PSME_00046726-RA	No alias	(at3g47570 : 621.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00049418-RA	No alias	(at3g47570 : 274.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00049438-RA	No alias	(at3g47570 : 582.0) Leucine-rich repeat protein kinase...	0.05	Orthogroups_2024-Update
PSME_00051245-RA	No alias	(at1g35710 : 388.0) Protein kinase family protein with...	0.04	Orthogroups_2024-Update
PSME_00053316-RA	No alias	(at2g24130 : 617.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
PSME_00056030-RA	No alias	(at2g26330 : 241.0) Homologous to receptor protein...	0.03	Orthogroups_2024-Update
PSME_00056074-RA	No alias	(at5g07280 : 194.0) Encodes EMS1 (EXCESS...	0.05	Orthogroups_2024-Update
Seita.4G177200.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.4G231800.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Seita.9G268400.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Sobic.008G175032.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
Sobic.009G040175.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Solyc02g070890	No alias	Ontology_term=GO:0004675	0.02	Orthogroups_2024-Update
Sopen02g021410	No alias	Leucine rich repeat	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0005976	polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0006073	cellular glucan metabolic process	IEP	Predicted GO
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Predicted GO
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0009250	glucan biosynthetic process	IEP	Predicted GO
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0044042	glucan metabolic process	IEP	Predicted GO
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
BP	GO:0051273	beta-glucan metabolic process	IEP	Predicted GO
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	95	153
IPR001611	Leu-rich_rpt	213	274
IPR001611	Leu-rich_rpt	511	569
IPR001611	Leu-rich_rpt	365	424
IPR000719	Prot_kinase_dom	674	853
IPR013210	LRR_N_plant-typ	25	62
IPR001611	Leu-rich_rpt	437	459

External Links

No external refs found!

PSME_00042187-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation