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  5. PSME_00042205-RA

PSME_00042205-RA


Description : (at1g15950 : 432.0) Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.; cinnamoyl coa reductase 1 (CCR1); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase (TAIR:AT1G80820.1); Has 11995 Blast hits to 11983 proteins in 1896 species: Archae - 218; Bacteria - 5371; Metazoa - 416; Fungi - 931; Plants - 2539; Viruses - 54; Other Eukaryotes - 2466 (source: NCBI BLink). & (p51108|dfra_maize : 201.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (reliability: 864.0) & (original description: no original description)


Gene families : OG_42_0000056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042205-RA
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
80798 No alias dihydroflavonol 4-reductase-like1 0.03 Orthogroups_2024-Update
A4A49_27007 No alias cinnamoyl-coa reductase 1 0.03 Orthogroups_2024-Update
Bradi3g54950 No alias cinnamoyl coa reductase 1 0.05 Orthogroups_2024-Update
Brara.F00606.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.17G252200 No alias dihydroflavonol 4-reductase 0.03 Orthogroups_2024-Update
LOC_Os09g25150 No alias cinnamoyl-CoA reductase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00043472-RA No alias (at1g15950 : 415.0) Encodes a cinnamoyl CoA reductase.... 0.02 Orthogroups_2024-Update
Seita.2G256800.1 No alias phaseic acid reductase *(CRL1/2) 0.04 Orthogroups_2024-Update
Seita.9G274900.1 No alias phaseic acid reductase *(CRL1/2) 0.04 Orthogroups_2024-Update
Sobic.001G037800.2 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 21 259
No external refs found!