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Description : (at3g22470 : 300.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 71386 Blast hits to 15586 proteins in 313 species: Archae - 4; Bacteria - 76; Metazoa - 1075; Fungi - 1368; Plants - 66381; Viruses - 0; Other Eukaryotes - 2482 (source: NCBI BLink). & (q76c99|rf1_orysa : 287.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 548.0) & (original description: no original description)
Gene families : OG_42_0013965 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0013965_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00042335-RA | |
| Cluster | HCCA clusters: Cluster_242 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
| CC | GO:0000786 | nucleosome | IEP | Predicted GO |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
| BP | GO:0006811 | ion transport | IEP | Predicted GO |
| BP | GO:0006814 | sodium ion transport | IEP | Predicted GO |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
| BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
| CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
| CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
| CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
| MF | GO:0071949 | FAD binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 14 | 35 |
| IPR002885 | Pentatricopeptide_repeat | 286 | 335 |
| IPR002885 | Pentatricopeptide_repeat | 110 | 158 |
| IPR002885 | Pentatricopeptide_repeat | 39 | 88 |
| IPR002885 | Pentatricopeptide_repeat | 182 | 230 |
| IPR002885 | Pentatricopeptide_repeat | 353 | 392 |
| IPR002885 | Pentatricopeptide_repeat | 416 | 446 |
| IPR002885 | Pentatricopeptide_repeat | 247 | 279 |
| No external refs found! |