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  5. PSME_00042404-RA

PSME_00042404-RA


Description : (at1g80820 : 384.0) Encodes an cinnamoyl CoA reductase isoform. Involved in lignin biosynthesis.; cinnamoyl coa reductase (CCR2); CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: cinnamoyl coa reductase 1 (TAIR:AT1G15950.1); Has 10779 Blast hits to 10766 proteins in 1817 species: Archae - 140; Bacteria - 4512; Metazoa - 410; Fungi - 946; Plants - 2512; Viruses - 14; Other Eukaryotes - 2245 (source: NCBI BLink). & (p51108|dfra_maize : 187.0) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR) (Dihydrokaempferol 4-reductase) - Zea mays (Maize) & (reliability: 768.0) & (original description: no original description)


Gene families : OG_42_0000056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042404-RA
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G057328 No alias cinnamoyl coa reductase 1 0.03 Orthogroups_2024-Update
HORVU5Hr1G073870.3 No alias phaseic acid reductase *(CRL1/2) 0.03 Orthogroups_2024-Update
LOC_Os08g40440 No alias dihydroflavonol-4-reductase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00010647-RA No alias (p51108|dfra_maize : 211.0) Dihydroflavonol-4-reductase... 0.06 Orthogroups_2024-Update
Potri.002G004500 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G181400 No alias cinnamoyl coa reductase 1 0.02 Orthogroups_2024-Update
Potri.009G052000 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G274900.1 No alias phaseic acid reductase *(CRL1/2) 0.03 Orthogroups_2024-Update
Sobic.002G146000.1 No alias cinnamoyl-CoA reductase *(CCR) 0.02 Orthogroups_2024-Update
Sobic.002G249900.1 No alias phaseic acid reductase *(CRL1/2) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 16 254
No external refs found!