PSME_00042483-RA

Description : (at3g47570 : 568.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink). & (p93194|rpk1_iponi : 468.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1036.0) & (original description: no original description)

Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00042483-RA
Cluster	HCCA clusters: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
405170	No alias	ERECTA-like 1	0.03	Orthogroups_2024-Update
MA_10254985g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
MA_10429751g0010	No alias	(at4g20140 : 412.0) Encodes GASSHO1 (GSO1), a putative...	0.03	Orthogroups_2024-Update
MA_125058g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Mp4g03710.1	No alias	LRR receptor-like serine/threonine-protein kinase GSO2...	0.02	Orthogroups_2024-Update
PSME_00009451-RA	No alias	(at5g46330 : 647.0) Encodes a leucine-rich repeat...	0.03	Orthogroups_2024-Update
PSME_00009453-RA	No alias	(at3g47570 : 507.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00014258-RA	No alias	(at3g47570 : 579.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00020006-RA	No alias	(at5g44700 : 633.0) Encodes GASSHO2 (GSO2), a putative...	0.03	Orthogroups_2024-Update
PSME_00025666-RA	No alias	(at2g24130 : 419.0) Leucine-rich receptor-like protein...	0.05	Orthogroups_2024-Update
PSME_00027859-RA	No alias	(at4g08850 : 291.0) Leucine-rich repeat receptor-like...	0.04	Orthogroups_2024-Update
PSME_00036348-RA	No alias	(at2g24130 : 481.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
PSME_00042187-RA	No alias	(at2g24130 : 489.0) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00049438-RA	No alias	(at3g47570 : 582.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00054300-RA	No alias	(at4g20140 : 389.0) Encodes GASSHO1 (GSO1), a putative...	0.06	Orthogroups_2024-Update
PSME_00055387-RA	No alias	(at3g47110 : 558.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00055651-RA	No alias	(at3g47110 : 645.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
Seita.1G036300.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Sobic.004G214800.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc07g018190	No alias	Receptor-kinase, putative (AHRD V3.3 *** B9SUC9_RICCO)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Predicted GO
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Predicted GO
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Predicted GO
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
MF	GO:0016229	steroid dehydrogenase activity	IEP	Predicted GO
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
CC	GO:0098797	plasma membrane protein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013210	LRR_N_plant-typ	58	97
IPR001611	Leu-rich_rpt	626	684
IPR001611	Leu-rich_rpt	343	402
IPR001611	Leu-rich_rpt	432	491
IPR000719	Prot_kinase_dom	792	998

External Links

No external refs found!

PSME_00042483-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation