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  5. PSME_00042506-RA

PSME_00042506-RA


Description : (at1g06340 : 99.8) Plant Tudor-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 263 Blast hits to 216 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). & (reliability: 199.6) & (original description: no original description)


Gene families : OG_42_0000649 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000649_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042506-RA
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
85351 No alias Plant Tudor-like protein 0.04 Orthogroups_2024-Update
At1g09320 No alias Agenet domain-containing protein... 0.04 Orthogroups_2024-Update
PSME_00020331-RA No alias (at1g06340 : 81.3) Plant Tudor-like protein; FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00025415-RA No alias no hits & (original description: no original description) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008395 Agenet-like_dom 8 67
No external refs found!